RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 FANCD2OSQ96PS1 177 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 AGXT2Q9BYV1 514 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 MAGEB5Q9BZ81 275 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 GPR63Q9BZJ6 419 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 SIL1Q9H173 461 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 KCTD10Q9H3F6 313 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 MS4A5Q9H3V2 200 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 ERVK-5Q9HDB9 667 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 CCDC177Q9NQR7 707 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 HPF1Q9NWY4 346 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 TMEM160Q9NX00 188 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 CLDND1Q9NY35 253 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 DPP7Q9UHL4 492 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 TMEFF2Q9UIK5 374 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 FEM1BQ9UK73 627 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 RABL2BQ9UNT1 228 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 MAN2B2Q9Y2E5 1009 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 MTF2Q9Y483 593 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 ATP23Q9Y6H3 246 aa5.67□□□□□ -1.5
R3HDM1-216ENST00000483065 SYNJ2BP-COX16A0A087WUM0 186 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 A0A0B4J269 797 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 C17orf113A0A1B0GUU1 675 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 hCG_1807616A0A1W2PRN6 198 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 LRRC14BA6NHZ5 514 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 LINC01387J3KSC0 135 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 RNGTTO60942 597 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 PTP4A3O75365 173 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 DGKIO75912 1065 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 NR2F1P10589 423 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 HLA-DPA1P20036 260 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 EDNRBP24530 442 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 PTX3P26022 381 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 NTF4P34130 210 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 ADH7P40394 386 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 PHKA1P46020 1223 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 NKX6-1P78426 367 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 EPS8Q12929 822 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SF3B3Q15393 1217 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SURF1Q15526 300 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 PKN2Q16513 984 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 ASIC2Q16515 512 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 PITRM1Q5JRX3 1037 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 ARMC4Q5T2S8 1044 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 ATPAF1Q5TC12 328 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 MCTP1Q6DN14 999 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 ESRP1Q6NXG1 681 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 USP17L6PQ6QN14 398 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 USP51Q70EK9 711 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 RASGRP2Q7LDG7 609 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 CPLX4Q7Z7G2 160 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SESTD1Q86VW0 696 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 KRT73Q86Y46 540 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 HERC6Q8IVU3 1022 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 CCDC103Q8IW40 242 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SAMD14Q8IZD0 417 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 TMEM57Q8N5G2 664 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 OR6Y1Q8NGX8 325 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 OR14C36Q8NHC7 312 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SPATA18Q8TC71 538 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 BRIX1Q8TDN6 353 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 NRG4Q8WWG1 115 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 DLG3Q92796 817 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SNX21Q969T3 373 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 COG8Q96MW5 612 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 C7orf25Q9BPX7 421 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 GPATCH1Q9BRR8 931 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 HGH1Q9BTY7 390 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SPON1Q9HCB6 807 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 PNPOQ9NVS9 261 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 DCAF16Q9NXF7 216 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 TMOD4Q9NZQ9 345 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 POGKQ9P215 609 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 PCOLCE2Q9UKZ9 415 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 HCN2Q9UL51 889 aa5.66□□□□□ -1.5
R3HDM1-216ENST00000483065 NT5C1B-RDH14C9J2C7 533 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 GPR25O00155 361 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 RTCAO00442 366 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 KRIT1O00522 736 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 PAX4O43316 350 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 MT-ND3P03897 115 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 TK1P04183 234 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 CLEC2LP0C7M8 214 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 FTH1P19P0C7X4 201 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 CSH1P0DML2 217 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 CSH2P0DML3 217 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 KITP10721 976 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 RARBP10826 455 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 KRT10P13645 584 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 SDHAP31040 664 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 AFF3P51826 1226 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 LGALS4P56470 323 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 SESN2P58004 480 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 RBP5P82980 135 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 TTLL4Q14679 1199 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 COG2Q14746 738 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 TARBP2Q15633 366 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 RAB30Q15771 203 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 CCDC178Q5BJE1 867 aa5.65□□□□□ -1.5
R3HDM1-216ENST00000483065 PSAPL1Q6NUJ1 521 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms