RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 RALBP1Q15311 655 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 TMEM259Q4ZIN3 620 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 SBK1Q52WX2 424 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 FAM78AQ5JUQ0 283 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 SLC23A3Q6PIS1 610 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 AGMOQ6ZNB7 445 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 SRRM1Q8IYB3 904 aaKnown RBP7.46□□□□□ -1.22
CHD6-209ENST00000482596 LPPQ93052 612 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 EAF2Q96CJ1 260 aaPredicted RBP7.46□□□□□ -1.22
CHD6-209ENST00000482596 HERC2P3Q9BVR0 1158 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 TPSD1Q9BZJ3 242 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 CPVLQ9H3G5 476 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 LRRC4CQ9HCJ2 640 aa7.46□□□□□ -1.22
CHD6-209ENST00000482596 KIAA1522Q9P206 1035 aaPredicted RBP7.46□□□□□ -1.22
CHD6-209ENST00000482596 DNMT3BQ9UBC3 853 aaKnown RBP7.46□□□□□ -1.22
CHD6-209ENST00000482596 NIPBLQ6KC79 2804 aaeCLIP7.45□□□□□ -1.22
CHD6-209ENST00000482596 SPECC1L-ADORA2AF8WAN1 911 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 SUV39H1O43463 412 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 DDHD2O94830 711 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 DKK1O94907 266 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 HSPD1P10809 573 aaKnown RBP7.45□□□□□ -1.22
CHD6-209ENST00000482596 PTGER3P43115 390 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 GRM4Q14833 912 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 KIZQ2M2Z5 673 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 PABPC1LQ4VXU2 614 aaKnown RBP7.45□□□□□ -1.22
CHD6-209ENST00000482596 C2orf27AQ580R0 203 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 TMCO4Q5TGY1 634 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 GLRX5Q86SX6 157 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 CAMKK1Q8N5S9 505 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 DAGLBQ8NCG7 672 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 DCAF4Q8WV16 495 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 CSRNP2Q9H175 543 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 IL17RBQ9NRM6 502 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 INPP5FQ9Y2H2 1132 aa7.45□□□□□ -1.22
CHD6-209ENST00000482596 CEP192Q8TEP8 1941 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 MED13LQ71F56 2210 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 AKAP9Q99996 3911 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 SMIM35A0A1B0GVV1 85 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 GSTTP1A0A1W2PQM5 241 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 RRN3P2A6NIE6 340 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 F8W810 466 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 GOLIM4O00461 696 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 OPLAHO14841 1288 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 GJB3O75712 270 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 PSMC3P17980 439 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 ADD2P35612 726 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 VIPR2P41587 438 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 GLUD2P49448 558 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 KPNA1P52294 538 aaPredicted RBP7.44□□□□□ -1.22
CHD6-209ENST00000482596 DGKEP52429 567 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 TLE1Q04724 770 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 PPM1LQ5SGD2 360 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 KIAA1614Q5VZ46 1190 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 SYT12Q8IV01 421 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 GALNT15Q8N3T1 639 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 NME8Q8N427 588 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 EXD3Q8N9H8 876 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 PNMA1Q8ND90 353 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 DNAJC2Q99543 621 aaKnown RBP7.44□□□□□ -1.22
CHD6-209ENST00000482596 ARHGAP9Q9BRR9 750 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 C1QTNF2Q9BXJ5 285 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 ZFP14Q9HCL3 533 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 DNAAF2Q9NVR5 837 aaKnown RBP7.44□□□□□ -1.22
CHD6-209ENST00000482596 MARCH5Q9NX47 278 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 ERAP1Q9NZ08 941 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 GDE1Q9NZC3 331 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 SEPT3Q9UH03 358 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 FBXW11Q9UKB1 542 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 MRPS23Q9Y3D9 190 aaKnown RBP7.44□□□□□ -1.22
CHD6-209ENST00000482596 PCDHA1Q9Y5I3 950 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 MYLKQ15746 1914 aa7.44□□□□□ -1.22
CHD6-209ENST00000482596 MYO16Q9Y6X6 1858 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 A0A0U1RQF3 1178 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 MYBPHLA2RUH7 354 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 GSG1L2A8MUP6 293 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 NRP1O14786 923 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 ZNF263O14978 683 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 ZNF862O60290 1169 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 ITGB2P05107 769 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 GRM5P41594 1212 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 AFF1P51825 1210 aaKnown RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 CLDN6P56747 220 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 DSG1Q02413 1049 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 NR5A1Q13285 461 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 NEDD9Q14511 834 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 TTF1Q15361 905 aaPredicted RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 PREPLQ4J6C6 727 aaPredicted RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 RRP12Q5JTH9 1297 aaKnown RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 ODR4Q5SWX8 454 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 ZNF746Q6NUN9 644 aaPredicted RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 MTHFD1LQ6UB35 978 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 RNF168Q8IYW5 571 aaPredicted RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 KIAA0319LQ8IZA0 1049 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 SYNPOQ8N3V7 929 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 CSGALNACT1Q8TDX6 532 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 EPS8L1Q8TE68 723 aa7.43□□□□□ -1.22
CHD6-209ENST00000482596 ZNF775Q96BV0 537 aaPredicted RBP7.43□□□□□ -1.22
CHD6-209ENST00000482596 NXPE2Q96DL1 559 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms