RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 KCND2Q9NZV8 630 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 FNIP2Q9P278 1114 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 TUBGCP4Q9UGJ1 667 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 SORCS3Q9UPU3 1222 aa11.46□□□□□ -0.57
CPSF4-212ENST00000482251 PDCD11Q14690 1871 aaKnown RBP11.46□□□□□ -0.58
CPSF4-212ENST00000482251 KMT2EQ8IZD2 1858 aa11.46□□□□□ -0.58
CPSF4-212ENST00000482251 PODXLO00592 558 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 HNRNPDLO14979 420 aaKnown RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 TBCAO75347 108 aaKnown RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 TOM1L1O75674 476 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 TNFSF9P41273 254 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 LIG4P49917 911 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 VCPP55072 806 aaKnown RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 NCKAP1LP55160 1127 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 PTPAQ15257 358 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 UPP1Q16831 310 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 ZBTB41Q5SVQ8 909 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 FOXD4L5Q5VV16 416 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 CD300LGQ6UXG3 332 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 HAUS6Q7Z4H7 955 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 MYCT1Q8N699 235 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 CMASQ8NFW8 434 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 FOXD4L4Q8WXT5 416 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 LARP4BQ92615 738 aaKnown RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 MFSD14AQ96MC6 490 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 CNTN3Q9P232 1028 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 LARSQ9P2J5 1176 aaKnown RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 FBXO2Q9UK22 296 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-212ENST00000482251 FBXW11Q9UKB1 542 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 ODF2LQ9ULJ1 636 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 MTMR6Q9Y217 621 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 ZNF318Q5VUA4 2279 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 MUC6Q6W4X9 2439 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
CPSF4-212ENST00000482251 PIEZO1Q92508 2521 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 TMEM189-UBE2V1I3L0A0 370 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 CCL16O15467 120 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 CLDN3O15551 220 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 C8AP07357 584 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 NMT1P30419 496 aaKnown RBP11.44□□□□□ -0.58
CPSF4-212ENST00000482251 OR1D2P34982 312 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 NTHL1P78549 312 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 SLC10A6Q3KNW5 377 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 IER5LQ5T953 404 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 LIN9Q5TKA1 542 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 LILRA6Q6PI73 481 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 DCLRE1AQ6PJP8 1040 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 ALKAL1Q6UXT8 129 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 RSPO2Q6UXX9 243 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-212ENST00000482251 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 DYMQ7RTS9 669 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 ZDHHC14Q8IZN3 488 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 SLC7A14Q8TBB6 771 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 RSAD2Q8WXG1 361 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 UROC1Q96N76 676 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 MYADMQ96S97 322 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 NTPCRQ9BSD7 190 aaKnown RBP11.44□□□□□ -0.58
CPSF4-212ENST00000482251 PLEKHA4Q9H4M7 779 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 PARVGQ9HBI0 331 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 WDR6Q9NNW5 1121 aaKnown RBP11.44□□□□□ -0.58
CPSF4-212ENST00000482251 SLC38A7Q9NVC3 462 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 DPP7Q9UHL4 492 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 POLIQ9UNA4 740 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 USTQ9Y2C2 406 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 CDY1Q9Y6F8 540 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 MTCL1Q9Y4B5 1905 aaKnown RBP11.44□□□□□ -0.58
CPSF4-212ENST00000482251 MYO10Q9HD67 2058 aa11.44□□□□□ -0.58
CPSF4-212ENST00000482251 TISP43B9A030 160 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 SLC26A4O43511 780 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 NARSO43776 548 aaKnown RBP11.43□□□□□ -0.58
CPSF4-212ENST00000482251 TRAK2O60296 914 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 ZMYND10O75800 440 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 KCNE1P15382 129 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 FGFR3P22607 806 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 MCM4P33991 863 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 GUCY2FP51841 1108 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 ZNF131P52739 623 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 ARPP19P56211 112 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 MCL1Q07820 350 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 ZC2HC1CQ53FD0 456 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-212ENST00000482251 XKR4Q5GH76 650 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 PPM1LQ5SGD2 360 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 ZPBP2Q6X784 338 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 GRASPQ7Z6J2 395 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-212ENST00000482251 SFR1Q86XK3 245 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 FBXL6Q8N531 539 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 KCTD17Q8N5Z5 321 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 STAMQ92783 540 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 KIF12Q96FN5 646 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
CPSF4-212ENST00000482251 PRKD2Q9BZL6 878 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
CPSF4-212ENST00000482251 IKZF4Q9H2S9 585 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms