RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 WDR12Q9GZL7 423 aaKnown RBP4.71□□□□□ -1.66
VPS41-212ENST00000482217 VPS33BQ9H267 617 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 MS4A5Q9H3V2 200 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 POFUT1Q9H488 388 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 TSPY26PQ9H489 355 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 PDRG1Q9NUG6 133 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 GGA3Q9NZ52 723 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 IFT80Q9P2H3 777 aaPredicted RBP4.71□□□□□ -1.66
VPS41-212ENST00000482217 NFKBIL1Q9UBC1 381 aaPredicted RBP4.71□□□□□ -1.66
VPS41-212ENST00000482217 RABL2AQ9UBK7 228 aaPredicted RBP4.71□□□□□ -1.66
VPS41-212ENST00000482217 ZFP69BQ9UJL9 534 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 ANKRD6Q9Y2G4 727 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 PMF1-BGLAPU3KQ54 211 aa4.71□□□□□ -1.66
VPS41-212ENST00000482217 ST20-MTHFSA0A0A6YYL1 179 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 TRIM75PA6NK02 468 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 TISP43B9A030 160 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 B9A039 149 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 ERC2O15083 957 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 IL18BPO95998 194 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 DNTTP04053 509 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 HSD3B1P14060 373 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 RPL17P18621 184 aaKnown RBP4.7□□□□□ -1.66
VPS41-212ENST00000482217 MUTP22033 750 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 ENPP1P22413 925 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 IL4RP24394 825 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 CYP2C19P33261 490 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 LIMS1P48059 325 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 AFF3P51826 1226 aaKnown RBP4.7□□□□□ -1.66
VPS41-212ENST00000482217 RCAN1P53805 252 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 SCAND1P57086 179 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 PLIN5Q00G26 463 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 ADCY2Q08462 1091 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 NFATC3Q12968 1075 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 TRIM29Q14134 588 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 MYBPC3Q14896 1274 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 ARMC4Q5T2S8 1044 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 KANK2Q63ZY3 851 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 ITPRIPL1Q6GPH6 555 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 TLDC1Q6P9B6 456 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 CNKSR3Q6P9H4 555 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 LRSAM1Q6UWE0 723 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 CHST15Q7LFX5 561 aaPredicted RBP4.7□□□□□ -1.66
VPS41-212ENST00000482217 CATSPER4Q7RTX7 472 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 FAM129CQ86XR2 697 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 MYLK4Q86YV6 388 aaPredicted RBP4.7□□□□□ -1.66
VPS41-212ENST00000482217 AFAP1L1Q8TED9 768 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 RSAD2Q8WXG1 361 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 ZBTB8AQ96BR9 441 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 TBCBQ99426 244 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 NUDT16L1Q9BRJ7 211 aaKnown RBP4.7□□□□□ -1.66
VPS41-212ENST00000482217 ISCA1Q9BUE6 129 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 KATNAL1Q9BW62 490 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 SEMA4AQ9H3S1 761 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 KCND1Q9NSA2 647 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 DIAPH3Q9NSV4 1193 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 COMMD8Q9NX08 183 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 STK26Q9P289 416 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 CDC23Q9UJX2 597 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 JAG2Q9Y219 1238 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 IKBKGQ9Y6K9 419 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 NUMBLQ9Y6R0 609 aa4.7□□□□□ -1.66
VPS41-212ENST00000482217 LCHNA4D1U4 455 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 TMEM110-MUSTN1A8MSY1 372 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 MASP2O00187 686 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 TPP1O14773 563 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 CPLX1O14810 134 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 RRP9O43818 475 aaKnown RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 SNUPNO95149 360 aaKnown RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 APOL3O95236 402 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 ATP1A3P13637 1013 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 RPS6KB1P23443 525 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 GPR3P46089 330 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 MAN2A2P49641 1150 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 RGS3P49796 1198 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 MAP3K12Q12852 859 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 GTF2H3Q13889 308 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 SMC1AQ14683 1233 aaKnown RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 SLMAPQ14BN4 828 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 PRR31Q5SQ13 230 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 CCDC30Q5VVM6 783 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 TMCO3Q6UWJ1 677 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 TTLL10Q6ZVT0 673 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 STK32CQ86UX6 486 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 STPG3Q8N7X2 389 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 C1orf162Q8NEQ5 155 aaPredicted RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 ADAMTS18Q8TE60 1221 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 FNIP1Q8TF40 1166 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 SSH1Q8WYL5 1049 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 HDAC2Q92769 488 aaKnown RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 JAKMIP2Q96AA8 810 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 RAX2Q96IS3 184 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 CCDC138Q96M89 665 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 SYT3Q9BQG1 590 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 TACO1Q9BSH4 297 aaKnown RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 APOL5Q9BWW9 433 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
VPS41-212ENST00000482217 GTPBP4Q9BZE4 634 aaKnown RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 TRIM6Q9C030 488 aaPredicted RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 PITHD1Q9GZP4 211 aaPredicted RBP4.69□□□□□ -1.66
VPS41-212ENST00000482217 MYLK2Q9H1R3 596 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms