RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 K7ESF4 209 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 ZNF197O14709 1029 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 HMGB1P09429 215 aaKnown RBP16.56■□□□□ 0.24
HDAC6-224ENST00000481929 CCNE1P24864 410 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 SPIRE1Q08AE8 756 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 PTGDRQ13258 359 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 UNQ6494/PRO21346Q6UXR6 183 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 DEPDC1BQ8WUY9 529 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 ASB16Q96NS5 453 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 CORO1BQ9BR76 489 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 ZMIZ1Q9ULJ6 1067 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
HDAC6-224ENST00000481929 GREB1Q4ZG55 1949 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 TICRRQ7Z2Z1 1910 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 PTGESO14684 152 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 ZNF263O14978 683 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 AXIN1O15169 862 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 SLC37A4O43826 429 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 KCNK5O95279 499 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 FGFR3P22607 806 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 ELF1P32519 619 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 EPHA7Q15375 998 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 PRSS36Q5K4E3 855 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 STPG1Q5TH74 334 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 VITQ6UXI7 678 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 RASEFQ8IZ41 740 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 ASAP3Q8TDY4 903 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 BRF1Q92994 677 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 TCEAL4Q96EI5 215 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 MSANTD3Q96H12 275 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 FAM20AQ96MK3 541 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 NFKBIZQ9BYH8 718 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 ARRDC1-AS1Q9H2J1 176 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 RGL1Q9NZL6 768 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 BACE2Q9Y5Z0 518 aa16.55■□□□□ 0.24
HDAC6-224ENST00000481929 ARID2Q68CP9 1835 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 ARHGEF37A1IGU5 675 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 WDR27A2RRH5 827 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 C1QTNF9BB2RNN3 333 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 PRRG1O14668 218 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 MICAL2O94851 1124 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 ZNF806P0C7X5 589 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 C1QTNF9P0C862 333 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 IFNAR1P17181 557 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 CCDC6Q16204 474 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 NTRK3Q16288 839 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 C1orf228Q6PIY5 440 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 Q6ZUG5 572 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 ANKS3Q6ZW76 656 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
HDAC6-224ENST00000481929 BLIDQ8IZY5 108 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 SMARCD2Q92925 531 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 KCNMB3Q9NPA1 279 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 RXFP3Q9NSD7 469 aa16.54■□□□□ 0.24
HDAC6-224ENST00000481929 RBM12Q9NTZ6 932 aaKnown RBP16.54■□□□□ 0.24
HDAC6-224ENST00000481929 ZZEF1O43149 2961 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 TMEM189-UBE2V1I3L0A0 370 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 NRG2O14511 850 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-224ENST00000481929 ZBTB39O15060 712 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 RECQL4O94761 1208 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 MLLT6P55198 1093 aaPredicted RBP16.53■□□□□ 0.24
HDAC6-224ENST00000481929 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 CTTNQ14247 550 aaKnown RBP16.53■□□□□ 0.24
HDAC6-224ENST00000481929 NAB2Q15742 525 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 INF2Q27J81 1249 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 CYP4A22Q5TCH4 519 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 NCAPH2Q6IBW4 605 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 WDR5BQ86VZ2 330 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 CSGALNACT1Q8TDX6 532 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 DYDC2Q96IM9 177 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 LOXL4Q96JB6 756 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 LSM14BQ9BX40 385 aaKnown RBP16.53■□□□□ 0.24
HDAC6-224ENST00000481929 SNTG2Q9NY99 539 aa16.53■□□□□ 0.24
HDAC6-224ENST00000481929 M0R2N6 131 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 TRAPPC3O43617 180 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 DGAT1O75907 488 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 B3GAT3O94766 335 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 EPN2O95208 641 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 CPA1P15085 419 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 GLRA2P23416 452 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 TKTP29401 623 aaKnown RBP16.52■□□□□ 0.24
HDAC6-224ENST00000481929 HOXA6P31267 233 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 ARL2P36404 184 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 VIPR2P41587 438 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 CCR2P41597 374 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 ROR1Q01973 937 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 PSAPL1Q6NUJ1 521 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 Q6ZS52 159 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 ZNF461Q8TAF7 563 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 DDX27Q96GQ7 796 aaKnown RBP16.52■□□□□ 0.24
HDAC6-224ENST00000481929 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
HDAC6-224ENST00000481929 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.24
HDAC6-224ENST00000481929 C8orf33Q9H7E9 229 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-224ENST00000481929 PRMT7Q9NVM4 692 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-224ENST00000481929 N4BP3O15049 544 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 MARCH6O60337 910 aa16.51■□□□□ 0.23
HDAC6-224ENST00000481929 RBM25P49756 843 aaKnown RBP16.51■□□□□ 0.23
HDAC6-224ENST00000481929 KPNA1P52294 538 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms