RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 CPB2Q96IY4 423 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 CCDC43Q96MW1 224 aaKnown RBP10.01□□□□□ -0.81
HLA-B-253ENST00000481849 EIF2AK1Q9BQI3 630 aaKnown RBP10.01□□□□□ -0.81
HLA-B-253ENST00000481849 TRAIPQ9BWF2 469 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 VN1R3Q9BXE9 311 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 EIF2AQ9BY44 585 aaKnown RBP10.01□□□□□ -0.81
HLA-B-253ENST00000481849 ADAM7Q9H2U9 754 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 RSAD1Q9HA92 442 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 PRG3Q9Y2Y8 225 aaPredicted RBP10.01□□□□□ -0.81
HLA-B-253ENST00000481849 TSPAN1O60635 241 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 SLITRK3O94933 977 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 PDGFBP01127 241 aaPredicted RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 ASGR2P07307 311 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 ITGA4P13612 1032 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 VCPP55072 806 aaKnown RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 GUCY1B3Q02153 619 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 ITIH3Q06033 890 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 SIGLEC14Q08ET2 396 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 TRIM29Q14134 588 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 PTPN14Q15678 1187 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 CALCRLQ16602 461 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 RNFT1Q5M7Z0 435 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 MAEAQ7L5Y9 396 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 MRPL10Q7Z7H8 261 aaKnown RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 CABP7Q86V35 215 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 CDR2LQ86X02 465 aaPredicted RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 DIS3L2Q8IYB7 885 aaKnown RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 FBXL6Q8N531 539 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 KREMEN2Q8NCW0 462 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 SMG8Q8ND04 991 aaKnown RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 PIGOQ8TEQ8 1089 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 TNFRSF25Q93038 417 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 SMOC2Q9H3U7 446 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 TTC12Q9H892 705 aaPredicted RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 CYLDQ9NQC7 956 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 XPNPEP1Q9NQW7 623 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 DBR1Q9UK59 544 aaKnown RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 PCDHA12Q9UN75 941 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 FAN1Q9Y2M0 1017 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 NR2E1Q9Y466 385 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 HES2Q9Y543 173 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 PPME1Q9Y570 386 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 PCDHB9Q9Y5E1 797 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 MYO7AQ13402 2215 aa10□□□□□ -0.81
HLA-B-253ENST00000481849 FNDC1Q4ZHG4 1894 aaPredicted RBP10□□□□□ -0.81
HLA-B-253ENST00000481849 LOXHD1Q8IVV2 1947 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 NRP1O14786 923 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 ASAP2O43150 1006 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 B4GALT5O43286 388 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 NEMFO60524 1076 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 ALDH2P05091 517 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
HLA-B-253ENST00000481849 KLRC2P26717 231 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 MLH1P40692 756 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 MTHFRP42898 656 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 OR1G1P47890 313 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 NEK4P51957 841 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 ANAPC15P60006 121 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 CAPSQ13938 189 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 GIT2Q14161 759 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 TFDP1Q14186 410 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 ATAT1Q5SQI0 421 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 TAS1R1Q7RTX1 841 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 LYSMD3Q7Z3D4 306 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 BMP8AQ7Z5Y6 402 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 SVOPQ8N4V2 548 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 NSUN7Q8NE18 718 aaKnown RBP9.99□□□□□ -0.81
HLA-B-253ENST00000481849 SLC22A17Q8WUG5 538 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 ASIC4Q96FT7 647 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 RIPOR3Q96MK2 946 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 NECTIN4Q96NY8 510 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 KLHL5Q96PQ7 755 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 GAD1Q99259 594 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 TRIM6Q9C030 488 aaPredicted RBP9.99□□□□□ -0.81
HLA-B-253ENST00000481849 POLR3FQ9H1D9 316 aaPredicted RBP9.99□□□□□ -0.81
HLA-B-253ENST00000481849 DZANK1Q9NVP4 752 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 IPPQ9Y573 584 aa9.99□□□□□ -0.81
HLA-B-253ENST00000481849 KMT2EQ8IZD2 1858 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 F8W810 466 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 GAS2O43903 313 aaKnown RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 USO1O60763 962 aaKnown RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 BRD1O95696 1058 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 CNPP09543 421 aaKnown RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 AKAP5P24588 427 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 MCM7P33993 719 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 SCNN1GP51170 649 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 PTENP60484 403 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 MBTD1Q05BQ5 628 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 NCBP1Q09161 790 aaKnown RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 MXD4Q14582 209 aaPredicted RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 KIAA1841Q6NSI8 718 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 NOTUMQ6P988 496 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 TDRD5Q8NAT2 981 aaKnown RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 RSPH1Q8WYR4 309 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 RABGGTAQ92696 567 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 ATOH1Q92858 354 aaPredicted RBP9.98□□□□□ -0.81
HLA-B-253ENST00000481849 B3GALT6Q96L58 329 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 HSD17B14Q9BPX1 270 aa9.98□□□□□ -0.81
HLA-B-253ENST00000481849 EMILIN2Q9BXX0 1053 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms