RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 C3orf58Q8NDZ4 430 aa25.71■■□□□ 1.71
TTC3-217ENST00000481605 CALML4Q96GE6 196 aa25.71■■□□□ 1.71
TTC3-217ENST00000481605 SNX27Q96L92 541 aa25.71■■□□□ 1.71
TTC3-217ENST00000481605 ZMAT2Q96NC0 199 aaKnown RBP25.71■■□□□ 1.71
TTC3-217ENST00000481605 PRRX2Q99811 253 aa25.71■■□□□ 1.71
TTC3-217ENST00000481605 SLC38A7Q9NVC3 462 aa25.71■■□□□ 1.71
TTC3-217ENST00000481605 ANKFY1Q9P2R3 1169 aa25.71■■□□□ 1.71
TTC3-217ENST00000481605 KMT2EQ8IZD2 1858 aa25.7■■□□□ 1.71
TTC3-217ENST00000481605 TRIP11Q15643 1979 aa25.7■■□□□ 1.71
TTC3-217ENST00000481605 SLC26A4O43511 780 aa25.7■■□□□ 1.7
TTC3-217ENST00000481605 TOM1L1O75674 476 aa25.7■■□□□ 1.7
TTC3-217ENST00000481605 BMP15O95972 392 aa25.7■■□□□ 1.7
TTC3-217ENST00000481605 LARSQ9P2J5 1176 aaKnown RBP25.7■■□□□ 1.7
TTC3-217ENST00000481605 VPS37CA5D8V6 355 aaPredicted RBP25.69■■□□□ 1.7
TTC3-217ENST00000481605 TRAPPC3O43617 180 aa25.69■■□□□ 1.7
TTC3-217ENST00000481605 SF3A1Q15459 793 aaKnown RBP25.69■■□□□ 1.7
TTC3-217ENST00000481605 LIN9Q5TKA1 542 aa25.69■■□□□ 1.7
TTC3-217ENST00000481605 ALYREFQ86V81 257 aaKnown RBP25.69■■□□□ 1.7
TTC3-217ENST00000481605 DDX27Q96GQ7 796 aaKnown RBP25.69■■□□□ 1.7
TTC3-217ENST00000481605 MYADMQ96S97 322 aa25.69■■□□□ 1.7
TTC3-217ENST00000481605 CNTN3Q9P232 1028 aa25.69■■□□□ 1.7
TTC3-217ENST00000481605 IGSF9Q9P2J2 1179 aa25.69■■□□□ 1.7
TTC3-217ENST00000481605 VWA8A3KMH1 1905 aa25.69■■□□□ 1.7
TTC3-217ENST00000481605 I3L4J1 428 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 KCNE1P15382 129 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 TKTP29401 623 aaKnown RBP25.68■■□□□ 1.7
TTC3-217ENST00000481605 BRCC3P46736 316 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 GRIN1Q05586 938 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 DHX8Q14562 1220 aaKnown RBP25.68■■□□□ 1.7
TTC3-217ENST00000481605 NOLC1Q14978 699 aaKnown RBP eCLIP25.68■■□□□ 1.7
TTC3-217ENST00000481605 LRRC15Q8TF66 581 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 MTRRQ9UBK8 725 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 ZDBF2Q9HCK1 2354 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 MYH11P35749 1972 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 C8AP07357 584 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 OR1D2P34982 312 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 LONP1P36776 959 aaKnown RBP25.68■■□□□ 1.7
TTC3-217ENST00000481605 PTPN5P54829 565 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 SEZ6Q53EL9 994 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 ZPBP2Q6X784 338 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 GET4Q7L5D6 327 aaPredicted RBP25.68■■□□□ 1.7
TTC3-217ENST00000481605 GPBP1Q86WP2 473 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 REEP2Q9BRK0 252 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 EPS15L1Q9UBC2 864 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 ODF2LQ9ULJ1 636 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 DUSP12Q9UNI6 340 aa25.68■■□□□ 1.7
TTC3-217ENST00000481605 PODXLO00592 558 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 CLDN3O15551 220 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 MEFVO15553 781 aaPredicted RBP25.67■■□□□ 1.7
TTC3-217ENST00000481605 NCKAP1LP55160 1127 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 TCF15Q12870 199 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 RAB33AQ14088 237 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 PPM1LQ5SGD2 360 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 RASSF8Q8NHQ8 419 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 RSAD2Q8WXG1 361 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 C18orf25Q96B23 403 aaPredicted RBP25.67■■□□□ 1.7
TTC3-217ENST00000481605 BLOC1S4Q9NUP1 217 aa25.67■■□□□ 1.7
TTC3-217ENST00000481605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.67■■□□□ 1.72e-9■□□□□ 8.8
TTC3-217ENST00000481605 H0YCG3 227 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 HNRNPA1P09651 372 aaKnown RBP eCLIP25.66■■□□□ 1.7
TTC3-217ENST00000481605 PLCG1P19174 1290 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 PDCP20941 246 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 MATR3P43243 847 aaKnown RBP eCLIP25.66■■□□□ 1.77e-7■■■□□ 17
TTC3-217ENST00000481605 MCL1Q07820 350 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 KARSQ15046 597 aaKnown RBP25.66■■□□□ 1.7
TTC3-217ENST00000481605 RSPO2Q6UXX9 243 aaPredicted RBP25.66■■□□□ 1.7
TTC3-217ENST00000481605 ANKS3Q6ZW76 656 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 HAUS6Q7Z4H7 955 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 GRASPQ7Z6J2 395 aaPredicted RBP25.66■■□□□ 1.7
TTC3-217ENST00000481605 BICD1Q96G01 975 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 MFSD1Q9H3U5 465 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 CDY1Q9Y6F8 540 aa25.66■■□□□ 1.7
TTC3-217ENST00000481605 MCM6Q14566 821 aa25.65■■□□□ 1.7
TTC3-217ENST00000481605 SLC10A6Q3KNW5 377 aa25.65■■□□□ 1.7
TTC3-217ENST00000481605 AXDND1Q5T1B0 1012 aaPredicted RBP25.65■■□□□ 1.7
TTC3-217ENST00000481605 SLC7A14Q8TBB6 771 aa25.65■■□□□ 1.7
TTC3-217ENST00000481605 BACE2Q9Y5Z0 518 aa25.65■■□□□ 1.7
TTC3-217ENST00000481605 CCL16O15467 120 aa25.64■■□□□ 1.7
TTC3-217ENST00000481605 HOXA9P31269 272 aa25.64■■□□□ 1.7
TTC3-217ENST00000481605 RPL9P32969 192 aaKnown RBP25.64■■□□□ 1.7
TTC3-217ENST00000481605 MRE11P49959 708 aa25.64■■□□□ 1.7
TTC3-217ENST00000481605 MYCT1Q8N699 235 aa25.64■■□□□ 1.7
TTC3-217ENST00000481605 RAD54LQ92698 747 aa25.64■■□□□ 1.7
TTC3-217ENST00000481605 HAPLN2Q9GZV7 340 aa25.64■■□□□ 1.7
TTC3-217ENST00000481605 POLIQ9UNA4 740 aa25.64■■□□□ 1.7
TTC3-217ENST00000481605 CITO14578 2027 aa25.64■■□□□ 1.69
TTC3-217ENST00000481605 NARSO43776 548 aaKnown RBP25.63■■□□□ 1.69
TTC3-217ENST00000481605 FAM13AO94988 1023 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 LAMP2P13473 410 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 FSHRP23945 695 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 PARVGQ9HBI0 331 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 FBXL21Q9UKT6 434 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 NUB1Q9Y5A7 615 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 CLIC4Q9Y696 253 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 XYLBO75191 536 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 KRT18P05783 430 aaKnown RBP25.63■■□□□ 1.69
TTC3-217ENST00000481605 ZNF131P52739 623 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 NTHL1P78549 312 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 UVSSAQ2YD98 709 aa25.63■■□□□ 1.69
TTC3-217ENST00000481605 ASTLQ6HA08 431 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms