RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 DDX12PQ92771 950 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 DDX27Q96GQ7 796 aaKnown RBP18.58■□□□□ 0.56
HSPG2-209ENST00000480900 RPGRIP1Q96KN7 1286 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 ZMAT2Q96NC0 199 aaKnown RBP18.58■□□□□ 0.56
HSPG2-209ENST00000480900 SEL1LQ9UBV2 794 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 A0A087X0B3 334 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 MYMKA6NI61 221 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 SPDYE4A6NLX3 237 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 MEFVO15553 781 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-209ENST00000480900 B3GAT3O94766 335 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 CLTAP09496 248 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 NMT1P30419 496 aaKnown RBP18.57■□□□□ 0.56
HSPG2-209ENST00000480900 CLCNKBP51801 687 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 SLC10A6Q3KNW5 377 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 HERC4Q5GLZ8 1057 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-209ENST00000480900 RTP2Q5QGT7 225 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 ATAT1Q5SQI0 421 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 FOXD4L5Q5VV16 416 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-209ENST00000480900 ATL3Q6DD88 541 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 PDXDC1Q6P996 788 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-209ENST00000480900 SFR1Q86XK3 245 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 MAP4K3Q8IVH8 894 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 HDAC7Q8WUI4 952 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 FOXD4L4Q8WXT5 416 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-209ENST00000480900 DNAJC19Q96DA6 116 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 HAPLN2Q9GZV7 340 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 POMKQ9H5K3 350 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 PLEKHA5Q9HAU0 1116 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 GOLGA2P5Q9HBQ8 144 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 MAN1C1Q9NR34 630 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 CDH22Q9UJ99 828 aa18.57■□□□□ 0.56
HSPG2-209ENST00000480900 GPR37L1O60883 481 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 CUTAO60888 179 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 GAP43P17677 238 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 PSMD5Q16401 504 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 SEZ6Q53EL9 994 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 PRSS55Q6UWB4 352 aaPredicted RBP18.56■□□□□ 0.56
HSPG2-209ENST00000480900 TMC5Q6UXY8 1006 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 C15orf39Q6ZRI6 1047 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 GPR149Q86SP6 731 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 CMASQ8NFW8 434 aaPredicted RBP18.56■□□□□ 0.56
HSPG2-209ENST00000480900 HVCN1Q96D96 273 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 NR2E1Q9Y466 385 aa18.56■□□□□ 0.56
HSPG2-209ENST00000480900 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.56■□□□□ 0.56
HSPG2-209ENST00000480900 A0A0B4J269 797 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 OGTO15294 1046 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 TRAPPC3O43617 180 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 FAM189A1O60320 539 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 WEE2P0C1S8 567 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 CXCL8P10145 99 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 RPL17P18621 184 aaKnown RBP18.55■□□□□ 0.56
HSPG2-209ENST00000480900 FGFR3P22607 806 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 RPL9P32969 192 aaKnown RBP18.55■□□□□ 0.56
HSPG2-209ENST00000480900 PKP1Q13835 747 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 TMEM31Q5JXX7 168 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 KANK3Q6NY19 840 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 SLC39A4Q6P5W5 647 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 CD300LGQ6UXG3 332 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 ZNF720Q7Z2F6 126 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 PDILTQ8N807 584 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 C3orf58Q8NDZ4 430 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 LNX1Q8TBB1 728 aaPredicted RBP18.55■□□□□ 0.56
HSPG2-209ENST00000480900 KCNG4Q8TDN1 519 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 RHOBTB2Q9BYZ6 727 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 PANK2Q9BZ23 570 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 PLEKHA4Q9H4M7 779 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 C11orf16Q9NQ32 467 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 MUTYHQ9UIF7 546 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 ZDBF2Q9HCK1 2354 aa18.55■□□□□ 0.56
HSPG2-209ENST00000480900 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 PODXLO00592 558 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 TGM5O43548 720 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 PPP1R37O75864 691 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 PAPLNO95428 1278 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 PPP2R3AQ06190 1150 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 ZC2HC1CQ53FD0 456 aaPredicted RBP18.54■□□□□ 0.56
HSPG2-209ENST00000480900 AXDND1Q5T1B0 1012 aaPredicted RBP18.54■□□□□ 0.56
HSPG2-209ENST00000480900 LILRA6Q6PI73 481 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 CYP26C1Q6V0L0 522 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 PALB2Q86YC2 1186 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 C18orf25Q96B23 403 aaPredicted RBP18.54■□□□□ 0.56
HSPG2-209ENST00000480900 TSPAN18Q96SJ8 248 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 MSTO1Q9BUK6 570 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 CUEDC2Q9H467 287 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 MRPL44Q9H9J2 332 aaKnown RBP18.54■□□□□ 0.56
HSPG2-209ENST00000480900 OLFML3Q9NRN5 406 aa18.54■□□□□ 0.56
HSPG2-209ENST00000480900 ZNF318Q5VUA4 2279 aa18.53■□□□□ 0.56
HSPG2-209ENST00000480900 FRMD3A2A2Y4 597 aa18.53■□□□□ 0.56
HSPG2-209ENST00000480900 IGFBP6P24592 240 aaPredicted RBP18.53■□□□□ 0.56
HSPG2-209ENST00000480900 SCN1AP35498 2009 aa18.53■□□□□ 0.56
HSPG2-209ENST00000480900 TNFSF9P41273 254 aa18.53■□□□□ 0.56
HSPG2-209ENST00000480900 E2F4Q16254 413 aa18.53■□□□□ 0.56
HSPG2-209ENST00000480900 FOXD4L6Q3SYB3 417 aaPredicted RBP18.53■□□□□ 0.56
HSPG2-209ENST00000480900 SLFN12LQ6IEE8 588 aa18.53■□□□□ 0.56
HSPG2-209ENST00000480900 FOXD4L3Q6VB84 417 aaPredicted RBP18.53■□□□□ 0.56
HSPG2-209ENST00000480900 GLYCTKQ8IVS8 523 aa18.53■□□□□ 0.56
HSPG2-209ENST00000480900 CLSTN3Q9BQT9 956 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms