RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 PAPLNO95428 1278 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 HSP90AA1P07900 732 aaKnown RBP16.41■□□□□ 0.22
TDP2-205ENST00000480495 RPL9P32969 192 aaKnown RBP16.41■□□□□ 0.22
TDP2-205ENST00000480495 LIG4P49917 911 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 PSMD5Q16401 504 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 LILRA6Q6PI73 481 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 PRSS55Q6UWB4 352 aaPredicted RBP16.41■□□□□ 0.22
TDP2-205ENST00000480495 CCDC73Q6ZRK6 1079 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 CEP57Q86XR8 500 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 PALB2Q86YC2 1186 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 LNX1Q8TBB1 728 aaPredicted RBP16.41■□□□□ 0.22
TDP2-205ENST00000480495 ZNF396Q96N95 335 aaPredicted RBP16.41■□□□□ 0.22
TDP2-205ENST00000480495 ZMAT2Q96NC0 199 aaKnown RBP16.41■□□□□ 0.22
TDP2-205ENST00000480495 PLEKHA5Q9HAU0 1116 aa16.41■□□□□ 0.22
TDP2-205ENST00000480495 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.41■□□□□ 0.22
TDP2-205ENST00000480495 CCDC195A0A1B0GUA6 201 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 C2CD4DB7Z1M9 353 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 HNRNPDLO14979 420 aaKnown RBP16.4■□□□□ 0.22
TDP2-205ENST00000480495 CLTAP09496 248 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 RPL17P18621 184 aaKnown RBP16.4■□□□□ 0.22
TDP2-205ENST00000480495 FGFR3P22607 806 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 SP100P23497 879 aaPredicted RBP16.4■□□□□ 0.22
TDP2-205ENST00000480495 ZXDAP98168 799 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 GTF2BQ00403 316 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 SOX4Q06945 474 aaPredicted RBP16.4■□□□□ 0.22
TDP2-205ENST00000480495 STK38Q15208 465 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 PTPN21Q16825 1174 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 SLC10A6Q3KNW5 377 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 CCDC149Q6ZUS6 474 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 SV2BQ7L1I2 683 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 TDRD5Q8NAT2 981 aaKnown RBP16.4■□□□□ 0.22
TDP2-205ENST00000480495 LINC00301Q8NCQ3 95 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 FIZ1Q96SL8 496 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 CLSTN3Q9BQT9 956 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 ST6GALNAC4Q9H4F1 302 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 GOLGA2P5Q9HBQ8 144 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 ZDHHC7Q9NXF8 308 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 SEL1LQ9UBV2 794 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
TDP2-205ENST00000480495 MYH11P35749 1972 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 PODXLO00592 558 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 CD300LGQ6UXG3 332 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 MAP4K3Q8IVH8 894 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 GLYCTKQ8IVS8 523 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 KREMEN2Q8NCW0 462 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 DDX12PQ92771 950 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 ACSF2Q96CM8 615 aaPredicted RBP16.39■□□□□ 0.21
TDP2-205ENST00000480495 HAPLN2Q9GZV7 340 aa16.39■□□□□ 0.21
TDP2-205ENST00000480495 A0A0B4J269 797 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 TTC26A0AVF1 554 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 SPTLC2O15270 562 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 OGTO15294 1046 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 MEFVO15553 781 aaPredicted RBP16.38■□□□□ 0.21
TDP2-205ENST00000480495 PPP6R2O75170 966 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 YEATS4O95619 227 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 SPATA31D3P0C874 917 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 CXCL8P10145 99 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 GAP43P17677 238 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 NMT1P30419 496 aaKnown RBP16.38■□□□□ 0.21
TDP2-205ENST00000480495 STAT6P42226 847 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 SEZ6Q53EL9 994 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 TRIM67Q6ZTA4 783 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 SPATA31D4Q6ZUB0 917 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 ANKS3Q6ZW76 656 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 OTOP3Q7RTS5 596 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 DYMQ7RTS9 669 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 C3orf58Q8NDZ4 430 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 SMG7Q92540 1137 aaKnown RBP16.38■□□□□ 0.21
TDP2-205ENST00000480495 C18orf25Q96B23 403 aaPredicted RBP16.38■□□□□ 0.21
TDP2-205ENST00000480495 HVCN1Q96D96 273 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 TSPAN18Q96SJ8 248 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 MTRRQ9UBK8 725 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 FBXW11Q9UKB1 542 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 ARIH1Q9Y4X5 557 aaPredicted RBP16.38■□□□□ 0.21
TDP2-205ENST00000480495 BACE2Q9Y5Z0 518 aa16.38■□□□□ 0.21
TDP2-205ENST00000480495 MYMKA6NI61 221 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 RFPL2O75678 378 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 ZMYND10O75800 440 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
TDP2-205ENST00000480495 IGFBP6P24592 240 aaPredicted RBP16.37■□□□□ 0.21
TDP2-205ENST00000480495 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 RAB33AQ14088 237 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 ZNF720Q7Z2F6 126 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 BMP8AQ7Z5Y6 402 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 SFR1Q86XK3 245 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 FEZF2Q8TBJ5 459 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 STAMQ92783 540 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 ZNF707Q96C28 371 aaPredicted RBP16.37■□□□□ 0.21
TDP2-205ENST00000480495 DNAJC19Q96DA6 116 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 MSTO1Q9BUK6 570 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 PRKD2Q9BZL6 878 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 WDR6Q9NNW5 1121 aaKnown RBP16.37■□□□□ 0.21
TDP2-205ENST00000480495 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
TDP2-205ENST00000480495 RAPGEFL1Q9UHV5 662 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 SORCS3Q9UPU3 1222 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 NUB1Q9Y5A7 615 aa16.37■□□□□ 0.21
TDP2-205ENST00000480495 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms