RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ANKRD36BP1Q96IX9 119 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 TTYH3Q9C0H2 523 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 CXCL16Q9H2A7 254 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 SIX2Q9NPC8 291 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 RGS18Q9NS28 235 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 KLK14Q9P0G3 267 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 CAPN11Q9UMQ6 739 aa19■□□□□ 0.63
UPF3A-206ENST00000480362 A0A0U1RQF3 1178 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 AKR1B15C9JRZ8 316 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-206ENST00000480362 ZNF623O75123 536 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 LRRN2O75325 713 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 TNNC2P02585 160 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 SKIP12755 728 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 FXR1P51114 621 aaKnown RBP eCLIP18.99■□□□□ 0.63
UPF3A-206ENST00000480362 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
UPF3A-206ENST00000480362 GSDMDP57764 484 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 ARID5BQ14865 1188 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 TMEM132DQ14C87 1099 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 KLHDC7AQ5VTJ3 777 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 TRAPPC11Q7Z392 1133 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 NT5DC4Q86YG4 428 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 SEPT8Q92599 483 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 KIF12Q96FN5 646 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 FTHL17Q9BXU8 183 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 MTMR12Q9C0I1 747 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 GANQ9H2C0 597 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 RAB20Q9NX57 234 aa18.99■□□□□ 0.63
UPF3A-206ENST00000480362 KIAA0100Q14667 2235 aaKnown RBP18.98■□□□□ 0.63
UPF3A-206ENST00000480362 A0A1W2PQJ5 194 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 TRIM43BA6NCK2 446 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 VNN1O95497 513 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 HLA-DRAP01903 254 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 CXCL10P02778 98 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 XKR4Q5GH76 650 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 LPPQ93052 612 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 TRIM43Q96BQ3 446 aaPredicted RBP18.98■□□□□ 0.63
UPF3A-206ENST00000480362 ZMAT2Q96NC0 199 aaKnown RBP18.98■□□□□ 0.63
UPF3A-206ENST00000480362 EDEM3Q9BZQ6 932 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 PRDM5Q9NQX1 630 aaPredicted RBP18.98■□□□□ 0.63
UPF3A-206ENST00000480362 CNTN3Q9P232 1028 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 DERAQ9Y315 318 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 LUC7L2Q9Y383 392 aaKnown RBP18.98■□□□□ 0.63
UPF3A-206ENST00000480362 C2CD2Q9Y426 696 aa18.98■□□□□ 0.63
UPF3A-206ENST00000480362 CITO14578 2027 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 MEIS3P2A8K0S8 358 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 C9IYK1 514 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 KIAA0355O15063 1070 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 MFAP3LO75121 409 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 CST3P01034 146 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-206ENST00000480362 IBSPP21815 317 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-206ENST00000480362 KRT9P35527 623 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 PIK3CAP42336 1068 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 POLR2FP61218 127 aaKnown RBP18.97■□□□□ 0.63
UPF3A-206ENST00000480362 LRMPQ12912 555 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 SCARA3Q6AZY7 606 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 FAM43BQ6ZT52 329 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-206ENST00000480362 SLC24A5Q71RS6 500 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 CACNA2D4Q7Z3S7 1137 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 DEFB128Q7Z7B8 93 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 ECHDC2Q86YB7 292 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 TC2NQ8N9U0 490 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 RNF169Q8NCN4 708 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 LINC01599Q8WXQ3 324 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 APBB2Q92870 758 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 PGBD4Q96DM1 585 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 TSPYL2Q9H2G4 693 aaPredicted RBP18.97■□□□□ 0.63
UPF3A-206ENST00000480362 NLRC4Q9NPP4 1024 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.97■□□□□ 0.635e-6■■■■■ 31.1
UPF3A-206ENST00000480362 C1orf112Q9NSG2 853 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 RNF19AQ9NV58 838 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 CEP72Q9P209 647 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 GIT1Q9Y2X7 761 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 TANC1Q9C0D5 1861 aa18.97■□□□□ 0.63
UPF3A-206ENST00000480362 SMIM28A0A1B0GU29 152 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 ENPP3O14638 875 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 TIMP1P01033 207 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 UCHL3P15374 230 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 KCNE1P15382 129 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 ATF7P17544 494 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-206ENST00000480362 FAM189BP81408 668 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 ZBED6P86452 979 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 NCOA4Q13772 614 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 ZBTB6Q15916 424 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 TCTN1Q2MV58 587 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 GLRA4Q5JXX5 417 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 PHLDB3Q6NSJ2 640 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 GJB7Q6PEY0 223 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 AGMOQ6ZNB7 445 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 CNGA4Q8IV77 575 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 CCDC150Q8NCX0 1101 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 ZNF397Q8NF99 534 aaPredicted RBP18.96■□□□□ 0.63
UPF3A-206ENST00000480362 TSPAN18Q96SJ8 248 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 PI4K2AQ9BTU6 479 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 DPP3Q9NY33 737 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 DNAJC12Q9UKB3 198 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 FHOD1Q9Y613 1164 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 RALGAPA2Q2PPJ7 1873 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 SCN5AQ14524 2016 aa18.96■□□□□ 0.63
UPF3A-206ENST00000480362 ZC3H11AO75152 810 aaKnown RBP eCLIP18.95■□□□□ 0.62
UPF3A-206ENST00000480362 RAG1P15918 1043 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms