RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 MTMR6Q9Y217 621 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 GTF3C3Q9Y5Q9 886 aa16.76■□□□□ 0.27
CDK9-203ENST00000480353 C2CD4DB7Z1M9 353 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 TGM5O43548 720 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 EFEMP2O95967 443 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 PROZP22891 400 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 PTPAQ15257 358 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 CCDC73Q6ZRK6 1079 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 SV2BQ7L1I2 683 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 KREMEN2Q8NCW0 462 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 SNX21Q969T3 373 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 CLIC6Q96NY7 704 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 BLOC1S4Q9NUP1 217 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 FBXO2Q9UK22 296 aaPredicted RBP16.75■□□□□ 0.27
CDK9-203ENST00000480353 TBX20Q9UMR3 447 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 USTQ9Y2C2 406 aa16.75■□□□□ 0.27
CDK9-203ENST00000480353 PDCD11Q14690 1871 aaKnown RBP16.74■□□□□ 0.27
CDK9-203ENST00000480353 TMEM221A6NGB7 291 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 TMEM189-UBE2V1I3L0A0 370 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 M0R296 226 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
CDK9-203ENST00000480353 PODXLO00592 558 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 XPOTO43592 962 aaKnown RBP16.74■□□□□ 0.27
CDK9-203ENST00000480353 BRD1O95696 1058 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 C1RP00736 705 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
CDK9-203ENST00000480353 GBP2P32456 591 aaPredicted RBP16.74■□□□□ 0.27
CDK9-203ENST00000480353 STAT6P42226 847 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 MCL1Q07820 350 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 MTMR3Q13615 1198 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 NAB2Q15742 525 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 UPP1Q16831 310 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 SEZ6Q53EL9 994 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 TRIM67Q6ZTA4 783 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 DYMQ7RTS9 669 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 SUGP1Q8IWZ8 645 aaKnown RBP16.74■□□□□ 0.27
CDK9-203ENST00000480353 CMASQ8NFW8 434 aaPredicted RBP16.74■□□□□ 0.27
CDK9-203ENST00000480353 PIK3R5Q8WYR1 880 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 PBXIP1Q96AQ6 731 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 CNTN3Q9P232 1028 aa16.74■□□□□ 0.27
CDK9-203ENST00000480353 DENND4AQ7Z401 1863 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 VWA8A3KMH1 1905 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 RFPL2O75678 378 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 CLTAP09496 248 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 KCNE1P15382 129 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
CDK9-203ENST00000480353 MCM4P33991 863 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 SIGLEC14Q08ET2 396 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 PPM1LQ5SGD2 360 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
CDK9-203ENST00000480353 ALKAL1Q6UXT8 129 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 ANKS3Q6ZW76 656 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 LNX1Q8TBB1 728 aaPredicted RBP16.73■□□□□ 0.27
CDK9-203ENST00000480353 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
CDK9-203ENST00000480353 FAM122AQ96E09 287 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 MSTO1Q9BUK6 570 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 RPF1Q9H9Y2 349 aaKnown RBP16.73■□□□□ 0.27
CDK9-203ENST00000480353 ZDHHC7Q9NXF8 308 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 LIMD1Q9UGP4 676 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 SORCS3Q9UPU3 1222 aa16.73■□□□□ 0.27
CDK9-203ENST00000480353 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.73■□□□□ 0.27
CDK9-203ENST00000480353 CXCL8P10145 99 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 IDEP14735 1019 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
CDK9-203ENST00000480353 OR1D2P34982 312 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 BRCC3P46736 316 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 ZNF131P52739 623 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 SLC39A14Q15043 492 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 XKR4Q5GH76 650 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 UBALD2Q8IYN6 164 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 ZDHHC14Q8IZN3 488 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 CLSTN3Q9BQT9 956 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 MRPL44Q9H9J2 332 aaKnown RBP16.72■□□□□ 0.27
CDK9-203ENST00000480353 PLEKHA5Q9HAU0 1116 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 POLIQ9UNA4 740 aa16.72■□□□□ 0.27
CDK9-203ENST00000480353 CLUHO75153 1309 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 H7C4K7 107 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 I3L4J1 428 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 ABLIM1O14639 778 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 SPTLC2O15270 562 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 OGTO15294 1046 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 XYLBO75191 536 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 ZMYND10O75800 440 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
CDK9-203ENST00000480353 ELF1P32519 619 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 SOX4Q06945 474 aaPredicted RBP16.71■□□□□ 0.27
CDK9-203ENST00000480353 SLC10A6Q3KNW5 377 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 HFE2Q6ZVN8 426 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 SPRYD3Q8NCJ5 442 aa16.71■□□□□ 0.27
CDK9-203ENST00000480353 LRRC15Q8TF66 581 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms