RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 UPP1Q16831 310 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 XKR4Q5GH76 650 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 GET4Q7L5D6 327 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-218ENST00000479554 BRAPQ7Z569 592 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 TMEM161BQ8NDZ6 487 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 CALML4Q96GE6 196 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 ACAP3Q96P50 834 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 MYADMQ96S97 322 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 NTPCRQ9BSD7 190 aaKnown RBP15.69■□□□□ 0.1
ATG4B-218ENST00000479554 MFSD1Q9H3U5 465 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 IGSF9Q9P2J2 1179 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 ANKFY1Q9P2R3 1169 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 DUSP12Q9UNI6 340 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 PIEZO1Q92508 2521 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 MYO10Q9HD67 2058 aa15.69■□□□□ 0.1
ATG4B-218ENST00000479554 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 VPS37CA5D8V6 355 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 ABLIM1O14639 778 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 ADAM12O43184 909 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 TOM1L1O75674 476 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 C8AP07357 584 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 MAPTP10636 758 aaKnown RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 IGFBP6P24592 240 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 MRE11P49959 708 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 SOX4Q06945 474 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 NOLC1Q14978 699 aaKnown RBP eCLIP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 ALKAL1Q6UXT8 129 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 C3orf58Q8NDZ4 430 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 RASSF8Q8NHQ8 419 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 DDX27Q96GQ7 796 aaKnown RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 ZBTB45Q96K62 511 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 ZMAT2Q96NC0 199 aaKnown RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 CHMP5Q9NZZ3 219 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 CNTN3Q9P232 1028 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 LARSQ9P2J5 1176 aaKnown RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 MTRRQ9UBK8 725 aa15.68■□□□□ 0.1
ATG4B-218ENST00000479554 CIZ1Q9ULV3 898 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-218ENST00000479554 MYH11P35749 1972 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 H0YCG3 227 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 I3L4J1 428 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 PODXLO00592 558 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 HNRNPA1P09651 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
ATG4B-218ENST00000479554 KCNE1P15382 129 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 TKTP29401 623 aaKnown RBP15.67■□□□□ 0.1
ATG4B-218ENST00000479554 HOXA9P31269 272 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 OR1D2P34982 312 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
ATG4B-218ENST00000479554 BRCC3P46736 316 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 TCF15Q12870 199 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 RAB33AQ14088 237 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 CD300LGQ6UXG3 332 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 ZPBP2Q6X784 338 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 ANKS3Q6ZW76 656 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 BICD1Q96G01 975 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.18e-14■□□□□ 9.8
ATG4B-218ENST00000479554 FBXL21Q9UKT6 434 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 ODF2LQ9ULJ1 636 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 CDY1Q9Y6F8 540 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 TRIP11Q15643 1979 aa15.67■□□□□ 0.1
ATG4B-218ENST00000479554 CLDN3O15551 220 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 XYLBO75191 536 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 FSHRP23945 695 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 LONP1P36776 959 aaKnown RBP15.66■□□□□ 0.1
ATG4B-218ENST00000479554 NUBP1P53384 320 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 NCKAP1LP55160 1127 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 CUL4AQ13619 759 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 DHX8Q14562 1220 aaKnown RBP15.66■□□□□ 0.1
ATG4B-218ENST00000479554 SF3A1Q15459 793 aaKnown RBP15.66■□□□□ 0.1
ATG4B-218ENST00000479554 ARSHQ5FYA8 562 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 ASTLQ6HA08 431 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-218ENST00000479554 GRASPQ7Z6J2 395 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-218ENST00000479554 GPBP1Q86WP2 473 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 TMEM105Q8N8V8 129 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 SLC7A14Q8TBB6 771 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 RSAD2Q8WXG1 361 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 NXPE3Q969Y0 559 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 REEP2Q9BRK0 252 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 POLIQ9UNA4 740 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 BACE2Q9Y5Z0 518 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 CITO14578 2027 aa15.66■□□□□ 0.1
ATG4B-218ENST00000479554 CCL16O15467 120 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 NARSO43776 548 aaKnown RBP15.65■□□□□ 0.1
ATG4B-218ENST00000479554 PLCG1P19174 1290 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 PDCP20941 246 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 RPL9P32969 192 aaKnown RBP15.65■□□□□ 0.1
ATG4B-218ENST00000479554 DDIT3P35638 169 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 MCL1Q07820 350 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 KARSQ15046 597 aaKnown RBP15.65■□□□□ 0.1
ATG4B-218ENST00000479554 SEZ6Q53EL9 994 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 AXDND1Q5T1B0 1012 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-218ENST00000479554 FLCNQ8NFG4 579 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 C18orf25Q96B23 403 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-218ENST00000479554 IRF2BPLQ9H1B7 796 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 NUB1Q9Y5A7 615 aa15.65■□□□□ 0.1
ATG4B-218ENST00000479554 USP34Q70CQ2 3546 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms