RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 TRIM62Q9BVG3 475 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 PSMC3IPQ9P2W1 217 aaPredicted RBP20.68■□□□□ 0.9
ABCA2-217ENST00000479446 GOLGA8RI6L899 631 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 C16orf86Q6ZW13 317 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 RANBP17Q9H2T7 1088 aaKnown RBP20.68■□□□□ 0.9
ABCA2-217ENST00000479446 RPAP3Q9H6T3 665 aaPredicted RBP20.68■□□□□ 0.9
ABCA2-217ENST00000479446 SMARCAL1Q9NZC9 954 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 NEU2Q9Y3R4 380 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 KCNN4O15554 427 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 CARSP49589 748 aaKnown RBP20.68■□□□□ 0.9
ABCA2-217ENST00000479446 AGGF1Q8N302 714 aaeCLIP20.68■□□□□ 0.9
ABCA2-217ENST00000479446 TBC1D16Q8TBP0 767 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 ROPN1BQ9BZX4 212 aaPredicted RBP20.68■□□□□ 0.9
ABCA2-217ENST00000479446 ISCUQ9H1K1 167 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 ROPN1Q9HAT0 212 aaPredicted RBP20.68■□□□□ 0.9
ABCA2-217ENST00000479446 SP110Q9HB58 689 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 HPS5Q9UPZ3 1129 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 FAM47DPA6NHR8 397 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 TMEM117Q9H0C3 514 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 GGT7Q9UJ14 662 aa20.68■□□□□ 0.9
ABCA2-217ENST00000479446 COPB2P35606 906 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 STILQ15468 1287 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 KCTD17Q8N5Z5 321 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 ZIM3Q96PE6 472 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 E5RI56 91 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 RASA1P20936 1047 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 RFX5P48382 616 aaPredicted RBP20.67■□□□□ 0.9
ABCA2-217ENST00000479446 FXR2P51116 673 aaKnown RBP eCLIP20.67■□□□□ 0.9
ABCA2-217ENST00000479446 TEX2Q8IWB9 1127 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 OR2W6PQ8NHA6 318 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 RNF217Q8TC41 542 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 TSSK1BQ9BXA7 367 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 DBR1Q9UK59 544 aaKnown RBP20.67■□□□□ 0.9
ABCA2-217ENST00000479446 ABCA6Q8N139 1617 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 EIF3DO15371 548 aaKnown RBP eCLIP20.67■□□□□ 0.9
ABCA2-217ENST00000479446 PDHBP11177 359 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 SLC4A7Q9Y6M7 1214 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 SESN2P58004 480 aaPredicted RBP20.67■□□□□ 0.9
ABCA2-217ENST00000479446 PIGHQ14442 188 aaPredicted RBP20.67■□□□□ 0.9
ABCA2-217ENST00000479446 KCNV1Q6PIU1 500 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 ARL8AQ96BM9 186 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 SEC16BQ96JE7 1060 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 SIK2Q9H0K1 926 aa20.67■□□□□ 0.9
ABCA2-217ENST00000479446 SCHIP1Q9P0W5 487 aaPredicted RBP20.67■□□□□ 0.9
ABCA2-217ENST00000479446 IRAK1P51617 712 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 GRAMD4Q6IC98 578 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 RBBP8NLQ8NC74 664 aaPredicted RBP20.66■□□□□ 0.9
ABCA2-217ENST00000479446 ERP44Q9BS26 406 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 ATP9BO43861 1147 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 KLRC1P26715 233 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 MMP19Q99542 508 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 SARS2Q9NP81 518 aaKnown RBP20.66■□□□□ 0.9
ABCA2-217ENST00000479446 RASSF10A6NK89 507 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 PDGFRAP16234 1089 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 ACOT2P49753 483 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 CDK17Q00537 523 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 SMAD1Q15797 465 aaKnown RBP20.66■□□□□ 0.9
ABCA2-217ENST00000479446 CATSPER1Q8NEC5 780 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 ADGRB3O60242 1522 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
ABCA2-217ENST00000479446 COMTP21964 271 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 HADHAP40939 763 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 KDSRQ06136 332 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 NCOA4Q13772 614 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 TRAPPC11Q7Z392 1133 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 RNF135Q8IUD6 432 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 PGBD4Q96DM1 585 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 ZC3H7BQ9UGR2 993 aaKnown RBP20.66■□□□□ 0.9
ABCA2-217ENST00000479446 APRTP07741 180 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 KLHDC7AQ5VTJ3 777 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 RFX8Q6ZV50 586 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.66■□□□□ 0.9
ABCA2-217ENST00000479446 PCDHB2Q9Y5E7 798 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 ALG6Q9Y672 507 aa20.66■□□□□ 0.9
ABCA2-217ENST00000479446 MOCS2O96007 188 aaPredicted RBP20.65■□□□□ 0.9
ABCA2-217ENST00000479446 RPA1P27694 616 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 HSD17B4P51659 736 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 ARHGEF26Q96DR7 871 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 EPAS1Q99814 870 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 OSBPL8Q9BZF1 889 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 P4HA2O15460 535 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 KLK7P49862 253 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 RNF219Q5W0B1 726 aaPredicted RBP20.65■□□□□ 0.9
ABCA2-217ENST00000479446 SLC24A3Q9HC58 644 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 AP3B1O00203 1094 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 SGSM1Q2NKQ1 1148 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 RAB6BQ9NRW1 208 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 PTPRUQ92729 1446 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 KCNQ2O43526 872 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 LCP1P13796 627 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 ALDH18A1P54886 795 aaKnown RBP20.65■□□□□ 0.9
ABCA2-217ENST00000479446 DNAL1Q4LDG9 190 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 C16orf87Q6PH81 154 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 REXO1L1PQ8IX06 675 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 C4orf33Q8N1A6 199 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 SH2D3AQ9BRG2 576 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 L2HGDHQ9H9P8 463 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 EML4Q9HC35 981 aaKnown RBP20.65■□□□□ 0.9
ABCA2-217ENST00000479446 SERPINB9P50453 376 aa20.65■□□□□ 0.9
ABCA2-217ENST00000479446 RMDN2Q96LZ7 410 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms