RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 TSPY10P0CW01 314 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 ID4P47928 161 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 CLK3P49761 638 aaKnown RBP5.93□□□□□ -1.46
LMBR1-216ENST00000477983 GUCY1B3Q02153 619 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 DDX10Q13206 875 aaKnown RBP5.93□□□□□ -1.46
LMBR1-216ENST00000477983 UGT8Q16880 541 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 PRAMEF14Q5SWL7 426 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 ABHD17BQ5VST6 288 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 GIMAP6Q6P9H5 292 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 SPATA31D4Q6ZUB0 917 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 DDX46Q7L014 1031 aaKnown RBP5.93□□□□□ -1.46
LMBR1-216ENST00000477983 LCORLQ8N3X6 602 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 CPEB3Q8NE35 698 aaKnown RBP5.93□□□□□ -1.46
LMBR1-216ENST00000477983 ZNF480Q8WV37 535 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 EAF2Q96CJ1 260 aaPredicted RBP5.93□□□□□ -1.46
LMBR1-216ENST00000477983 ACAP3Q96P50 834 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 BBC3Q96PG8 261 aaPredicted RBP5.93□□□□□ -1.46
LMBR1-216ENST00000477983 SIN3AQ96ST3 1273 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 ADAM2Q99965 735 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 TOPORSQ9NS56 1045 aaPredicted RBP5.93□□□□□ -1.46
LMBR1-216ENST00000477983 GCC2Q8IWJ2 1684 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 CDC42BPBQ9Y5S2 1711 aa5.93□□□□□ -1.46
LMBR1-216ENST00000477983 KDM6BO15054 1643 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 PREX2Q70Z35 1606 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 MYO5CQ9NQX4 1742 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 DRGXA6NNA5 263 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 ULK1O75385 1050 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 HLA-DOAP06340 250 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 HKR1P10072 659 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 EGR2P11161 476 aaPredicted RBP5.92□□□□□ -1.46
LMBR1-216ENST00000477983 SESN3P58005 492 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 BLOC1S1P78537 153 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 ARMC6Q6NXE6 501 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 HDGFL2Q7Z4V5 671 aaPredicted RBP5.92□□□□□ -1.46
LMBR1-216ENST00000477983 CLRN3Q8NCR9 226 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 RAX2Q96IS3 184 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 NEU1Q99519 415 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 TTC1Q99614 292 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 PTGFRNQ9P2B2 879 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 APOBEC2Q9Y235 224 aaKnown RBP5.92□□□□□ -1.46
LMBR1-216ENST00000477983 SAMD9LQ8IVG5 1584 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 ANKRD30AQ9BXX3 1397 aa5.92□□□□□ -1.46
LMBR1-216ENST00000477983 CROCC2H7BZ55 1655 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 ADGBQ8N7X0 1667 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 WDR7Q9Y4E6 1490 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 KIAA0355O15063 1070 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 TYRP1P17643 537 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 DDX6P26196 483 aaKnown RBP eCLIP5.91□□□□□ -1.46
LMBR1-216ENST00000477983 SEC24CP53992 1094 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 CLRN1P58418 232 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 FOXI1Q12951 378 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 STRN3Q13033 797 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 MST1LQ2TV78 715 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 STRIP1Q5VSL9 837 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 AGAP9Q5VTM2 703 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 EFCAB2Q5VUJ9 269 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 ZNF572Q7Z3I7 529 aaPredicted RBP5.91□□□□□ -1.46
LMBR1-216ENST00000477983 ADGRG3Q86Y34 549 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 CMTR2Q8IYT2 770 aaKnown RBP5.91□□□□□ -1.46
LMBR1-216ENST00000477983 GPR156Q8NFN8 814 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 SLC35B2Q8TB61 432 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 COX11Q9Y6N1 276 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 FPGT-TNNI3KV9GXZ4 949 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 ATRNL1Q5VV63 1379 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 PLCH2O75038 1416 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 NCOA1Q15788 1441 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 C9orf84Q5VXU9 1444 aa5.91□□□□□ -1.46
LMBR1-216ENST00000477983 MBD5Q9P267 1494 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 TLDC2A0PJX2 215 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 CFIP05156 583 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 ENPP1P22413 925 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 PRR16Q569H4 304 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 CYB5RLQ6IPT4 315 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 STRA8Q7Z7C7 330 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 UBR7Q8N806 425 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 RNF169Q8NCN4 708 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 SLKQ9H2G2 1235 aaPredicted RBP5.9□□□□□ -1.46
LMBR1-216ENST00000477983 CAAP1Q9H8G2 361 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 ALG13Q9NP73 1137 aaKnown RBP5.9□□□□□ -1.46
LMBR1-216ENST00000477983 FAM30AQ9NZY2 134 aa5.9□□□□□ -1.46
LMBR1-216ENST00000477983 USP15Q9Y4E8 981 aaPredicted RBP5.9□□□□□ -1.46
LMBR1-216ENST00000477983 COL11A2P13942 1736 aaPredicted RBP5.9□□□□□ -1.47
LMBR1-216ENST00000477983 ADGRL2O95490 1459 aa5.9□□□□□ -1.47
LMBR1-216ENST00000477983 CCDC141Q6ZP82 1450 aa5.9□□□□□ -1.47
LMBR1-216ENST00000477983 SHANK2Q9UPX8 1470 aa5.9□□□□□ -1.47
LMBR1-216ENST00000477983 SYCP2Q9BX26 1530 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 ARHGEF5Q12774 1597 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 CXorf49A8MYA2 514 aaPredicted RBP5.89□□□□□ -1.47
LMBR1-216ENST00000477983 SPDEFO95238 335 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 SOX5P35711 763 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 MRPS9P82933 396 aaKnown RBP5.89□□□□□ -1.47
LMBR1-216ENST00000477983 RESTQ13127 1097 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 TP53BP2Q13625 1128 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
LMBR1-216ENST00000477983 GJC2Q5T442 439 aaPredicted RBP5.89□□□□□ -1.47
LMBR1-216ENST00000477983 ATXN7L2Q5T6C5 722 aaPredicted RBP5.89□□□□□ -1.47
LMBR1-216ENST00000477983 SYCE2Q6PIF2 218 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 RHOT2Q8IXI1 618 aa5.89□□□□□ -1.47
LMBR1-216ENST00000477983 TRMT2AQ8IZ69 625 aaKnown RBP5.89□□□□□ -1.47
LMBR1-216ENST00000477983 OR7D4Q8NG98 312 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms