RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 PRKAG3Q9UGI9 489 aa9.09□□□□□ -0.95
ERCC8-205ENST00000477893 FBXO2Q9UK22 296 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-205ENST00000477893 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 INPPL1O15357 1258 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 THP07101 528 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 SMTNP53814 917 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 YARSP54577 528 aaKnown RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 KCNC3Q14003 757 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 CBX2Q14781 532 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 STK38Q15208 465 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 PTPAQ15257 358 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 TPRNQ4KMQ1 711 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 CES5AQ6NT32 575 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 PRSS55Q6UWB4 352 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 MPZL3Q6UWV2 235 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 DYMQ7RTS9 669 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 APBB1IPQ7Z5R6 666 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 PALB2Q86YC2 1186 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 TMEM130Q8N3G9 435 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 TMEM161BQ8NDZ6 487 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 LARP4BQ92615 738 aaKnown RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 FBXL18Q96ME1 805 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 TMUB1Q9BVT8 246 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 TIPINQ9BVW5 301 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 CCDC94Q9BW85 323 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 PHF7Q9BWX1 381 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 GPR62Q9BZJ7 368 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 MAN1C1Q9NR34 630 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 BLOC1S4Q9NUP1 217 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 DAXXQ9UER7 740 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-205ENST00000477893 ADAM28Q9UKQ2 775 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 TNFSF13BQ9Y275 285 aa9.08□□□□□ -0.96
ERCC8-205ENST00000477893 TDRD15B5MCY1 1934 aaKnown RBP9.07□□□□□ -0.96
ERCC8-205ENST00000477893 I3L4J1 428 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 TEX28O15482 410 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 DCXO43602 365 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 ADH1AP07327 375 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 MAPTP10636 758 aaKnown RBP9.07□□□□□ -0.96
ERCC8-205ENST00000477893 IGFBP6P24592 240 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-205ENST00000477893 TXLNAP40222 546 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 CLCN4P51793 760 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 SPAG1Q07617 926 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 CAMK2BQ13554 666 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 GIT2Q14161 759 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 NOLC1Q14978 699 aaKnown RBP eCLIP9.07□□□□□ -0.96
ERCC8-205ENST00000477893 TMEM31Q5JXX7 168 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 RTP2Q5QGT7 225 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 FAM171A1Q5VUB5 890 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 TMEM184AQ6ZMB5 413 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 RNF135Q8IUD6 432 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 PDILTQ8N807 584 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 SLC22A17Q8WUG5 538 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 SPIRE2Q8WWL2 714 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 SUSD6Q92537 303 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 C1QTNF1Q9BXJ1 281 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 S1PR5Q9H228 398 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 POMKQ9H5K3 350 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 TMEM134Q9H6X4 195 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 PARVGQ9HBI0 331 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 DZANK1Q9NVP4 752 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 TBC1D7Q9P0N9 293 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 LARSQ9P2J5 1176 aaKnown RBP9.07□□□□□ -0.96
ERCC8-205ENST00000477893 TFIP11Q9UBB9 837 aaKnown RBP9.07□□□□□ -0.96
ERCC8-205ENST00000477893 CCDC39Q9UFE4 941 aa9.07□□□□□ -0.96
ERCC8-205ENST00000477893 RBM19Q9Y4C8 960 aaKnown RBP9.07□□□□□ -0.96
ERCC8-205ENST00000477893 SF3B1O75533 1304 aaKnown RBP eCLIP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 PI4K2BG5E9Z4 385 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 HNRNPDLO14979 420 aaKnown RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 GLUD1P00367 558 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 CXCL8P10145 99 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 MCF2P10911 925 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 HOXB8P17481 243 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 NMT1P30419 496 aaKnown RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 GRM5P41594 1212 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 STAT6P42226 847 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 LIG4P49917 911 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 CLCNKBP51801 687 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 NCKAP1LP55160 1127 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 DSG1Q02413 1049 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 SOX4Q06945 474 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 NAB2Q15742 525 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 USP41Q3LFD5 358 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 ZBTB41Q5SVQ8 909 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 KIAA0319Q5VV43 1072 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 RRAGBQ5VZM2 374 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 HAUS6Q7Z4H7 955 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 PPFIBP1Q86W92 1011 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 KRI1Q8N9T8 703 aaKnown RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 SNX21Q969T3 373 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 C18orf25Q96B23 403 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 SNX27Q96L92 541 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 ACAP3Q96P50 834 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 PPP1R10Q96QC0 940 aaKnown RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 ADAM7Q9H2U9 754 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 SFXN1Q9H9B4 322 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 C17orf75Q9HAS0 396 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 C11orf16Q9NQ32 467 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 TOPORSQ9NS56 1045 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms