RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 SEMA4DQ92854 862 aa10.07□□□□□ -0.8
PGK1-204ENST00000477335 ZFP42Q96MM3 310 aa10.07□□□□□ -0.8
PGK1-204ENST00000477335 ACAP3Q96P50 834 aa10.07□□□□□ -0.8
PGK1-204ENST00000477335 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
PGK1-204ENST00000477335 TRIM6Q9C030 488 aaPredicted RBP10.07□□□□□ -0.8
PGK1-204ENST00000477335 MTMR12Q9C0I1 747 aa10.07□□□□□ -0.8
PGK1-204ENST00000477335 TMEM117Q9H0C3 514 aa10.07□□□□□ -0.8
PGK1-204ENST00000477335 CNTN3Q9P232 1028 aa10.07□□□□□ -0.8
PGK1-204ENST00000477335 SIK3Q9Y2K2 1263 aa10.07□□□□□ -0.8
PGK1-204ENST00000477335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.07□□□□□ -0.8
PGK1-204ENST00000477335 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
PGK1-204ENST00000477335 PPEF2O14830 753 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 EPHB6O15197 1021 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 B4GALT3O60512 393 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 FGFR1P11362 822 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 ACTN1P12814 892 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 ITGA4P13612 1032 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 KRT13P13646 458 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 IGFBP6P24592 240 aaPredicted RBP10.06□□□□□ -0.8
PGK1-204ENST00000477335 MLH1P40692 756 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 FMO5P49326 533 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 DEFB103AP81534 67 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 SOX4Q06945 474 aaPredicted RBP10.06□□□□□ -0.8
PGK1-204ENST00000477335 ENPEPQ07075 957 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 NAB2Q15742 525 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 ZBTB6Q15916 424 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 EPC2Q52LR7 807 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 CNKSR3Q6P9H4 555 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 SV2AQ7L0J3 742 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 TMCO2Q7Z6W1 182 aaPredicted RBP10.06□□□□□ -0.8
PGK1-204ENST00000477335 RNF169Q8NCN4 708 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 LMO3Q8TAP4 145 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 TAS1R2Q8TE23 839 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 APBB2Q92870 758 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 C18orf25Q96B23 403 aaPredicted RBP10.06□□□□□ -0.8
PGK1-204ENST00000477335 GAD1Q99259 594 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 TRIM5Q9C035 493 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 CACNG4Q9UBN1 327 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 TUBGCP4Q9UGJ1 667 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 SIX4Q9UIU6 781 aa10.06□□□□□ -0.8
PGK1-204ENST00000477335 AJAP1Q9UKB5 411 aaPredicted RBP10.06□□□□□ -0.8
PGK1-204ENST00000477335 SMIM28A0A1B0GU29 152 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 RNF225M0QZC1 329 aaPredicted RBP10.05□□□□□ -0.8
PGK1-204ENST00000477335 EVI5O60447 810 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 OFD1O75665 1012 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 IL18RAPO95256 599 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 PARNO95453 639 aaKnown RBP10.05□□□□□ -0.8
PGK1-204ENST00000477335 KCNE1P15382 129 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 SLC9A1P19634 815 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 RAB27AP51159 221 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 MYL7Q01449 175 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 POU5F1Q01860 360 aaKnown RBP10.05□□□□□ -0.8
PGK1-204ENST00000477335 UBXN1Q04323 297 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 SYCP1Q15431 976 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 KYAT1Q16773 422 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 ZACNQ401N2 412 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 GJB7Q6PEY0 223 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 SLC24A5Q71RS6 500 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 APBB1IPQ7Z5R6 666 aaPredicted RBP10.05□□□□□ -0.8
PGK1-204ENST00000477335 WDR49Q8IV35 697 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 VSTM4Q8IW00 320 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 EFCAB3Q8N7B9 438 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 C1orf127Q8N9H9 656 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 FTHL17Q9BXU8 183 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 TMEM8AQ9HCN3 771 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 SIX2Q9NPC8 291 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 IL23AQ9NPF7 189 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■□□□ 12.4
PGK1-204ENST00000477335 C1orf112Q9NSG2 853 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 HCSTQ9UBK5 93 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 MICAL3Q7RTP6 2002 aa10.05□□□□□ -0.8
PGK1-204ENST00000477335 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 PES1O00541 588 aaKnown RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 PMM2O15305 246 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 INPPL1O15357 1258 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 NOL4O94818 638 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 CST3P01034 146 aaPredicted RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 HLA-DRAP01903 254 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 TNNI1P19237 187 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 PON1P27169 355 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 GTF2H1P32780 548 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 MXI1P50539 228 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 SCNN1GP51170 649 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 TFAMQ00059 246 aaKnown RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 GOLGA8FQ08AF8 430 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 GOLGA8DPQ0D2H9 430 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 TMEM240Q5SV17 173 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 TRAPPC11Q7Z392 1133 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 ARHGEF19Q8IW93 802 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 HS6ST3Q8IZP7 471 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 TMEM199Q8N511 208 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 ANKRD20A12PQ8NF67 263 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 HELQQ8TDG4 1101 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 MRFAP1L1Q96HT8 127 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 PPP1R10Q96QC0 940 aaKnown RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 ERGIC2Q96RQ1 377 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms