RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 CNTN3Q9P232 1028 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 FBXW11Q9UKB1 542 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 ODF2LQ9ULJ1 636 aa11.82□□□□□ -0.52
SEC13-214ENST00000476597 H0YCG3 227 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 CLDN3O15551 220 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 ADAM12O43184 909 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 TRAPPC3O43617 180 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 N4BP1O75113 896 aaKnown RBP11.81□□□□□ -0.52
SEC13-214ENST00000476597 PLCG1P19174 1290 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 SCP2P22307 547 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 RPL9P32969 192 aaKnown RBP11.81□□□□□ -0.52
SEC13-214ENST00000476597 DDIT3P35638 169 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 ZNF131P52739 623 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 MCL1Q07820 350 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 RESTQ13127 1097 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 RAB33AQ14088 237 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 DHX8Q14562 1220 aaKnown RBP11.81□□□□□ -0.52
SEC13-214ENST00000476597 MCM6Q14566 821 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
SEC13-214ENST00000476597 SLC10A6Q3KNW5 377 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 IER5LQ5T953 404 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 HAUS6Q7Z4H7 955 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 GPBP1Q86WP2 473 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 SUGP1Q8IWZ8 645 aaKnown RBP11.81□□□□□ -0.52
SEC13-214ENST00000476597 C3orf58Q8NDZ4 430 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 RAD54LQ92698 747 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 STAMQ92783 540 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 REEP2Q9BRK0 252 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 CCSER1Q9C0I3 900 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 HAPLN2Q9GZV7 340 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 KCNK12Q9HB15 430 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 BACE2Q9Y5Z0 518 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
SEC13-214ENST00000476597 PODXLO00592 558 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 PDGFBP01127 241 aaPredicted RBP11.8□□□□□ -0.52
SEC13-214ENST00000476597 TKTP29401 623 aaKnown RBP11.8□□□□□ -0.52
SEC13-214ENST00000476597 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
SEC13-214ENST00000476597 OR1D2P34982 312 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 BRCC3P46736 316 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 NOLC1Q14978 699 aaKnown RBP eCLIP11.8□□□□□ -0.529e-6■□□□□ 8.9
SEC13-214ENST00000476597 SEZ6Q53EL9 994 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 RSPO2Q6UXX9 243 aaPredicted RBP11.8□□□□□ -0.52
SEC13-214ENST00000476597 MYCT1Q8N699 235 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 EPSTI1Q96J88 318 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 MYADMQ96S97 322 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 SMOC2Q9H3U7 446 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 PIDD1Q9HB75 910 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 PARVGQ9HBI0 331 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 IGSF9Q9P2J2 1179 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 ANKFY1Q9P2R3 1169 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 EPS15L1Q9UBC2 864 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 MTRRQ9UBK8 725 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 TBX20Q9UMR3 447 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 SRPRBQ9Y5M8 271 aaKnown RBP11.8□□□□□ -0.52
SEC13-214ENST00000476597 CLUHO75153 1309 aa11.8□□□□□ -0.52
SEC13-214ENST00000476597 ZNF318Q5VUA4 2279 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 I3L4J1 428 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 TRAK2O60296 914 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 FAM13AO94988 1023 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 PIGRP01833 764 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 CLTAP09496 248 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 HNRNPA1P09651 372 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEC13-214ENST00000476597 HARSP12081 509 aaKnown RBP11.79□□□□□ -0.52
SEC13-214ENST00000476597 MARCKSP29966 332 aaPredicted RBP11.79□□□□□ -0.52
SEC13-214ENST00000476597 AVPR2P30518 371 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 HOXA9P31269 272 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 GBP2P32456 591 aaPredicted RBP11.79□□□□□ -0.52
SEC13-214ENST00000476597 GTF2BQ00403 316 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 TDGQ13569 410 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 FAM173BQ6P4H8 233 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 ANKS3Q6ZW76 656 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 USP49Q70CQ1 688 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 LARP4BQ92615 738 aaKnown RBP11.79□□□□□ -0.52
SEC13-214ENST00000476597 C18orf25Q96B23 403 aaPredicted RBP11.79□□□□□ -0.52
SEC13-214ENST00000476597 FIZ1Q96SL8 496 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 PRRX2Q99811 253 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 PLEKHA5Q9HAU0 1116 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEC13-214ENST00000476597 FBXO2Q9UK22 296 aaPredicted RBP11.79□□□□□ -0.52
SEC13-214ENST00000476597 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 CDY1Q9Y6F8 540 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 DMDP11532 3685 aa11.79□□□□□ -0.52
SEC13-214ENST00000476597 TTC26A0AVF1 554 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 K7ELQ4 463 aaPredicted RBP11.78□□□□□ -0.52
SEC13-214ENST00000476597 SYN3O14994 580 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 KRT18P05783 430 aaKnown RBP11.78□□□□□ -0.52
SEC13-214ENST00000476597 C8AP07357 584 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 ADRB2P07550 413 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 POU2F2P09086 479 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 LAMP2P13473 410 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 MATR3P43243 847 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEC13-214ENST00000476597 VCPP55072 806 aaKnown RBP11.78□□□□□ -0.52
SEC13-214ENST00000476597 NHLH1Q02575 133 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 MRPL58Q14197 206 aaKnown RBP11.78□□□□□ -0.52
SEC13-214ENST00000476597 ZBTB6Q15916 424 aa11.78□□□□□ -0.52
SEC13-214ENST00000476597 KYAT1Q16773 422 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms