RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GRM5P41594 1212 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 NPTX2P47972 431 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 HMGN5P82970 282 aaKnown RBP14.42□□□□□ -0.1
MRPL55-228ENST00000476267 MAPK7Q13164 816 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 IL17AQ16552 155 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 UVSSAQ2YD98 709 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 AXDND1Q5T1B0 1012 aaPredicted RBP14.42□□□□□ -0.1
MRPL55-228ENST00000476267 DCLRE1AQ6PJP8 1040 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 POTEHQ6S545 545 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 RTL10Q7L3V2 364 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 ITFG1Q8TB96 612 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 IFT74Q96LB3 600 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 UROC1Q96N76 676 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 ACO2Q99798 780 aaKnown RBP14.42□□□□□ -0.1
MRPL55-228ENST00000476267 DDX23Q9BUQ8 820 aaKnown RBP14.42□□□□□ -0.1
MRPL55-228ENST00000476267 DDX19AQ9NUU7 478 aaKnown RBP14.42□□□□□ -0.1
MRPL55-228ENST00000476267 HCFC1R1Q9NWW0 138 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 DNMT3BQ9UBC3 853 aaKnown RBP14.42□□□□□ -0.1
MRPL55-228ENST00000476267 KIAA1024Q9UPX6 916 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 CDY1Q9Y6F8 540 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 MIA3Q5JRA6 1907 aa14.42□□□□□ -0.1
MRPL55-228ENST00000476267 E9PMD0 336 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 TBC1D4O60343 1298 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 EIF5BO60841 1220 aaKnown RBP14.41□□□□□ -0.1
MRPL55-228ENST00000476267 B3GAT3O94766 335 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 DCNP07585 359 aaKnown RBP14.41□□□□□ -0.1
MRPL55-228ENST00000476267 BRCC3P46736 316 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 GPC5P78333 572 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 TMEM132AQ24JP5 1023 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 ERICH6BQ5W0A0 696 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 NPAS3Q8IXF0 933 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 ADSSL1Q8N142 457 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 PJA1Q8NG27 643 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 ZMAT2Q96NC0 199 aaKnown RBP14.41□□□□□ -0.1
MRPL55-228ENST00000476267 MMTAG2Q9BU76 263 aaKnown RBP14.41□□□□□ -0.1
MRPL55-228ENST00000476267 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 SIT1Q9Y3P8 196 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 PCDHB6Q9Y5E3 794 aa14.41□□□□□ -0.1
MRPL55-228ENST00000476267 PP2D1A8MPX8 630 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 I3L4J1 428 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 K7ERI5 159 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 XYLBO75191 536 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 PEX3P56589 373 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 PTGDRQ13258 359 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 SLC5A9Q2M3M2 681 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 SLC8B1Q6J4K2 584 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 C1orf186Q6ZWK4 172 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 MTSS1LQ765P7 747 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 KCNK18Q7Z418 384 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 MAML2Q8IZL2 1156 aaPredicted RBP14.4□□□□□ -0.1
MRPL55-228ENST00000476267 SNX29Q8TEQ0 813 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 ZSCAN31Q96LW9 406 aaPredicted RBP14.4□□□□□ -0.1
MRPL55-228ENST00000476267 RUSC1Q9BVN2 902 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 FOXQ1Q9C009 403 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 AVENQ9NQS1 362 aaPredicted RBP14.4□□□□□ -0.1
MRPL55-228ENST00000476267 KCNH3Q9ULD8 1083 aa14.4□□□□□ -0.1
MRPL55-228ENST00000476267 NOL7Q9UMY1 257 aaKnown RBP14.4□□□□□ -0.1
MRPL55-228ENST00000476267 CITO14578 2027 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 ARHGEF37A1IGU5 675 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 WDR27A2RRH5 827 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 HIP1RO75146 1068 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 LRRN2O75325 713 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 ABLIM3O94929 683 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 KCNE1P15382 129 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 PRPHP41219 470 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 ROR1Q01973 937 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 MRPL58Q14197 206 aaKnown RBP14.39□□□□□ -0.11
MRPL55-228ENST00000476267 PABPC1LQ4VXU2 614 aaKnown RBP14.39□□□□□ -0.11
MRPL55-228ENST00000476267 RINT1Q6NUQ1 792 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 ANKS3Q6ZW76 656 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 NTPCRQ9BSD7 190 aaKnown RBP14.39□□□□□ -0.11
MRPL55-228ENST00000476267 SEMA4AQ9H3S1 761 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.39□□□□□ -0.11
MRPL55-228ENST00000476267 SH2B1Q9NRF2 756 aaPredicted RBP14.39□□□□□ -0.11
MRPL55-228ENST00000476267 CNTN3Q9P232 1028 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 STK24Q9Y6E0 443 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 ZNF292O60281 2723 aa14.39□□□□□ -0.11
MRPL55-228ENST00000476267 SHISA7A6NL88 538 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 STK25O00506 426 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 LAD1O00515 517 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 PODXLO00592 558 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 TRAPPC3O43617 180 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 SP9P0CG40 484 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 MCF2P10911 925 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 CDC25AP30304 524 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 ZNF568Q3ZCX4 644 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 PRSS36Q5K4E3 855 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 SPECC1Q5M775 1068 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 VARS2Q5ST30 1063 aaKnown RBP14.38□□□□□ -0.11
MRPL55-228ENST00000476267 HYIQ5T013 277 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-228ENST00000476267 C1orf210Q8IVY1 113 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 ZNF461Q8TAF7 563 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 DRC1Q96MC2 740 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 KXD1Q9BQD3 176 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 CCDC94Q9BW85 323 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-228ENST00000476267 TARS2Q9BW92 718 aaKnown RBP14.38□□□□□ -0.11
MRPL55-228ENST00000476267 MRPL4Q9BYD3 311 aaKnown RBP14.38□□□□□ -0.11
MRPL55-228ENST00000476267 C17orf75Q9HAS0 396 aa14.38□□□□□ -0.11
MRPL55-228ENST00000476267 TOPORSQ9NS56 1045 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms