RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 NOX1Q9Y5S8 564 aa6.24□□□□□ -1.41
LTN1-204ENST00000475344 COL4A3Q01955 1670 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 AATKQ6ZMQ8 1374 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 PPFIA2O75334 1257 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 SPDEFO95238 335 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 ITGAMP11215 1152 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 PROZP22891 400 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 PCSK1P29120 753 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 SLC6A9P48067 706 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 COL10A1Q03692 680 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 MGAT2Q10469 447 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.23□□□□□ -1.41
LTN1-204ENST00000475344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.23□□□□□ -1.41
LTN1-204ENST00000475344 RAB24Q969Q5 203 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 RNF31Q96EP0 1072 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 C7orf25Q9BPX7 421 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 MANSC1Q9H8J5 431 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 KLHL11Q9NVR0 708 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 FBXO34Q9NWN3 711 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 TESQ9UGI8 421 aaKnown RBP6.23□□□□□ -1.41
LTN1-204ENST00000475344 ZNHIT2Q9UHR6 403 aa6.23□□□□□ -1.41
LTN1-204ENST00000475344 A0A1B0GTW7 788 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 KIAA0391O15091 583 aaKnown RBP6.22□□□□□ -1.41
LTN1-204ENST00000475344 TEX33O43247 280 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 CDKL5O76039 1030 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 NUDT3O95989 172 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 CFIP05156 583 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 AVPR1BP47901 424 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 UBXN2BQ14CS0 331 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 RNF187Q5TA31 235 aaPredicted RBP6.22□□□□□ -1.41
LTN1-204ENST00000475344 ZGPATQ8N5A5 531 aaKnown RBP6.22□□□□□ -1.41
LTN1-204ENST00000475344 ASB10Q8WXI3 467 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 ALOXE3Q9BYJ1 711 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 MKS1Q9NXB0 559 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 SLC23A1Q9UHI7 598 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 ATP8A1Q9Y2Q0 1164 aa6.22□□□□□ -1.41
LTN1-204ENST00000475344 TCRBV7S2A1N4TA0A589 114 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 XPOTO43592 962 aaKnown RBP6.21□□□□□ -1.42
LTN1-204ENST00000475344 PRSS23O95084 383 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 ELANEP08246 267 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 MYBL2P10244 700 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 DDCP20711 480 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 HSD11B2P80365 405 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 CREMQ03060 361 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 OCA2Q04671 838 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 FAM50AQ14320 339 aaKnown RBP6.21□□□□□ -1.42
LTN1-204ENST00000475344 OTUD7BQ6GQQ9 843 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 TMEM132CQ8N3T6 1108 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 CASKIN2Q8WXE0 1202 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 PUS7LQ9H0K6 701 aaKnown RBP6.21□□□□□ -1.42
LTN1-204ENST00000475344 TMX1Q9H3N1 280 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 RNPEPQ9H4A4 650 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 DKK2Q9UBU2 259 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 USP25Q9UHP3 1055 aa6.21□□□□□ -1.42
LTN1-204ENST00000475344 MTO1Q9Y2Z2 717 aaKnown RBP6.21□□□□□ -1.42
LTN1-204ENST00000475344 MYBBP1AQ9BQG0 1328 aaKnown RBP6.21□□□□□ -1.42
LTN1-204ENST00000475344 PIPSLA2A3N6 862 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 K7ESF4 209 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 ERN1O75460 977 aaKnown RBP6.2□□□□□ -1.42
LTN1-204ENST00000475344 GPANK1O95872 356 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
LTN1-204ENST00000475344 AMY1AP04745 511 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 HKR1P10072 659 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 FGFR4P22455 802 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 ITKQ08881 620 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 ABCB5Q2M3G0 1257 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 FOXR2Q6PJQ5 311 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 MIGA2Q7L4E1 593 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 NECAB2Q7Z6G3 386 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 RSPH3Q86UC2 560 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 SLC44A3Q8N4M1 653 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 CYFIP2Q96F07 1278 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 TOR3AQ9H497 397 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 GSTO2Q9H4Y5 243 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 RIOX1Q9H6W3 641 aa6.2□□□□□ -1.42
LTN1-204ENST00000475344 SAP30BPQ9UHR5 308 aaKnown RBP6.2□□□□□ -1.42
LTN1-204ENST00000475344 SBNO2Q9Y2G9 1366 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 CDHR4A6H8M9 788 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 LMNAP02545 664 aaKnown RBP6.19□□□□□ -1.42
LTN1-204ENST00000475344 ALAS1P13196 640 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 PLA2G5P39877 138 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 GUCY2FP51841 1108 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 TAP1Q03518 808 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 MTM1Q13496 603 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 ABHD17BQ5VST6 288 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 B3GNTL1Q67FW5 361 aaPredicted RBP6.19□□□□□ -1.42
LTN1-204ENST00000475344 OLFML1Q6UWY5 402 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 SEM1Q6ZVN7 128 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 C1orf162Q8NEQ5 155 aaPredicted RBP6.19□□□□□ -1.42
LTN1-204ENST00000475344 JADE3Q92613 823 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 MTMR8Q96EF0 704 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 TMX3Q96JJ7 454 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 ZNF277Q9NRM2 450 aaPredicted RBP6.19□□□□□ -1.42
LTN1-204ENST00000475344 TRHDEQ9UKU6 1024 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 PCDHA13Q9Y5I0 950 aa6.19□□□□□ -1.42
LTN1-204ENST00000475344 CCDC78A2IDD5 438 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 TRIM75PA6NK02 468 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 MARCH11A6NNE9 402 aa6.18□□□□□ -1.42
LTN1-204ENST00000475344 NDUFS2O75306 463 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms