RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 FAM84AQ96KN4 292 aa14.82□□□□□ -0.04
TRAF4-210ENST00000475329 GLT1D1Q96MS3 346 aa14.82□□□□□ -0.04
TRAF4-210ENST00000475329 CCDC94Q9BW85 323 aaPredicted RBP14.82□□□□□ -0.04
TRAF4-210ENST00000475329 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.049e-7■■□□□ 14.2
TRAF4-210ENST00000475329 REXO2Q9Y3B8 237 aaKnown RBP14.82□□□□□ -0.04
TRAF4-210ENST00000475329 CDY2AQ9Y6F7 541 aa14.82□□□□□ -0.04
TRAF4-210ENST00000475329 GRIN2DO15399 1336 aa14.82□□□□□ -0.04
TRAF4-210ENST00000475329 MROH7Q68CQ1 1323 aa14.82□□□□□ -0.04
TRAF4-210ENST00000475329 EVI5O60447 810 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 LRRN2O75325 713 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 OFD1O75665 1012 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 LCA5LO95447 670 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 VNN1O95497 513 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 TNNC2P02585 160 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 TUBB4AP04350 444 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 TMEM191BP0C7N4 346 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 TNNT1P13805 278 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 HOXA11P31270 313 aaPredicted RBP14.81□□□□□ -0.04
TRAF4-210ENST00000475329 PTGISQ16647 500 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 DUOXA2Q1HG44 320 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 ARHGAP29Q52LW3 1261 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 ENOSF1Q7L5Y1 443 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 KIAA1328Q86T90 577 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 TMEM192Q8IY95 271 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 SH3TC2Q8TF17 1288 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 TMEM40Q8WWA1 233 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 ACAP3Q96P50 834 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 IMPG2Q9BZV3 1241 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 MTMR12Q9C0I1 747 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 GPR88Q9GZN0 384 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 HAUS4Q9H6D7 363 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.81□□□□□ -0.041e-9■■■■■ 64.8
TRAF4-210ENST00000475329 PIN4Q9Y237 131 aaKnown RBP14.81□□□□□ -0.04
TRAF4-210ENST00000475329 PTPN22Q9Y2R2 807 aa14.81□□□□□ -0.04
TRAF4-210ENST00000475329 KBTBD13C9JR72 458 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 PNMA6AP0CW24 399 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-210ENST00000475329 TFAMQ00059 246 aaKnown RBP14.8□□□□□ -0.04
TRAF4-210ENST00000475329 GCNT1Q02742 428 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 PTK7Q13308 1070 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 NCOA4Q13772 614 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 ASTE1Q2TB18 679 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-210ENST00000475329 TRAPPC11Q7Z392 1133 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 CD302Q8IX05 232 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 EFCAB13Q8IY85 973 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 TXLNBQ8N3L3 684 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 HELQQ8TDG4 1101 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 PI4K2AQ9BTU6 479 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 SENP6Q9GZR1 1112 aaPredicted RBP14.8□□□□□ -0.04
TRAF4-210ENST00000475329 ASB7Q9H672 318 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 LUC7LQ9NQ29 371 aaKnown RBP14.8□□□□□ -0.04
TRAF4-210ENST00000475329 NOD1Q9Y239 953 aa14.8□□□□□ -0.04
TRAF4-210ENST00000475329 A0A1W2PQ45 241 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-210ENST00000475329 A0A1W2PQY0 241 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 LACTBL1A8MY62 500 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 RBAK-RBAKDNI3L0D1 243 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 CLSTN1O94985 981 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 PCNTO95613 3336 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 CTSHP09668 335 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 VAV2P52735 878 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 NOP14P78316 857 aaKnown RBP14.79□□□□□ -0.04
TRAF4-210ENST00000475329 PTK2Q05397 1052 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 MGAT3Q09327 533 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 FAM228AQ86W67 206 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 NT5DC4Q86YG4 428 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 SHC3Q92529 594 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 KAT5Q92993 513 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 TATDN2Q93075 761 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 WNT8BQ93098 351 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 JAKMIP2Q96AA8 810 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 IFIH1Q9BYX4 1025 aaKnown RBP14.79□□□□□ -0.04
TRAF4-210ENST00000475329 TRIM6Q9C030 488 aaPredicted RBP14.79□□□□□ -0.04
TRAF4-210ENST00000475329 UNC93B1Q9H1C4 597 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 LZTFL1Q9NQ48 299 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 PHF24Q9UPV7 400 aa14.79□□□□□ -0.04
TRAF4-210ENST00000475329 A0A0U1RQG5 324 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 FOXN3O00409 490 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 ZNF263O14978 683 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 RPS6KA5O75582 802 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 NFICP08651 508 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 TBXAS1P24557 533 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 THPOP40225 353 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 YARSP54577 528 aaKnown RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 CYP27A1Q02318 531 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 GFPT1Q06210 699 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 TRPC3Q13507 836 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 TMEM132DQ14C87 1099 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 SLC18A3Q16572 532 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 SLC10A6Q3KNW5 377 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 JADE1Q6IE81 842 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 ZNF662Q6ZS27 426 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 ZNF571Q7Z3V5 609 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 FAM71AQ8IYT1 594 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 EIF2AQ9BY44 585 aaKnown RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 TSGA10Q9BZW7 698 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 PLEKHA5Q9HAU0 1116 aa14.78□□□□□ -0.04
TRAF4-210ENST00000475329 NOC2LQ9Y3T9 749 aaKnown RBP14.78□□□□□ -0.04
TRAF4-210ENST00000475329 C2CD2Q9Y426 696 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms