RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 N4BP1O75113 896 aaKnown RBP17.69■□□□□ 0.42
ITGB5-205ENST00000474838 HARSP12081 509 aaKnown RBP17.69■□□□□ 0.42
ITGB5-205ENST00000474838 PLCG1P19174 1290 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 SCP2P22307 547 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 HOXD11P31277 338 aaPredicted RBP17.69■□□□□ 0.42
ITGB5-205ENST00000474838 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
ITGB5-205ENST00000474838 GRIN1Q05586 938 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 LIN9Q5TKA1 542 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 C3orf58Q8NDZ4 430 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 LRRC15Q8TF66 581 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 DDX27Q96GQ7 796 aaKnown RBP17.69■□□□□ 0.42
ITGB5-205ENST00000474838 ZMAT2Q96NC0 199 aaKnown RBP17.69■□□□□ 0.42
ITGB5-205ENST00000474838 PRRX2Q99811 253 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 SMOC2Q9H3U7 446 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 PIDD1Q9HB75 910 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 BLOC1S4Q9NUP1 217 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 MTRRQ9UBK8 725 aa17.69■□□□□ 0.42
ITGB5-205ENST00000474838 VWA8A3KMH1 1905 aa17.68■□□□□ 0.42
ITGB5-205ENST00000474838 HNRNPA1P09651 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
ITGB5-205ENST00000474838 GBP2P32456 591 aaPredicted RBP17.68■□□□□ 0.42
ITGB5-205ENST00000474838 ZNF131P52739 623 aa17.68■□□□□ 0.42
ITGB5-205ENST00000474838 MCL1Q07820 350 aa17.68■□□□□ 0.42
ITGB5-205ENST00000474838 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
ITGB5-205ENST00000474838 CD300LGQ6UXG3 332 aa17.68■□□□□ 0.42
ITGB5-205ENST00000474838 RAD54LQ92698 747 aa17.68■□□□□ 0.42
ITGB5-205ENST00000474838 ZBTB45Q96K62 511 aaPredicted RBP17.68■□□□□ 0.42
ITGB5-205ENST00000474838 EPS15L1Q9UBC2 864 aa17.68■□□□□ 0.42
ITGB5-205ENST00000474838 MYH11P35749 1972 aa17.68■□□□□ 0.42
ITGB5-205ENST00000474838 MTCL1Q9Y4B5 1905 aaKnown RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 PODXLO00592 558 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 CLDN3O15551 220 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 MEFVO15553 781 aaPredicted RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 ADAM12O43184 909 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 FAM13AO94988 1023 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 PDGFBP01127 241 aaPredicted RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 IGFBP6P24592 240 aaPredicted RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 TKTP29401 623 aaKnown RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 HOXA9P31269 272 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 VCPP55072 806 aaKnown RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 NHLH1Q02575 133 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 TDGQ13569 410 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 RAB33AQ14088 237 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 ANKS3Q6ZW76 656 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 HAUS6Q7Z4H7 955 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 LARP4BQ92615 738 aaKnown RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 BICD1Q96G01 975 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 INTS4Q96HW7 963 aaKnown RBP17.67■□□□□ 0.42
ITGB5-205ENST00000474838 BACH2Q9BYV9 841 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 KCNK12Q9HB15 430 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 PARVGQ9HBI0 331 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 IGSF9Q9P2J2 1179 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 BACE2Q9Y5Z0 518 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 ZDBF2Q9HCK1 2354 aa17.67■□□□□ 0.42
ITGB5-205ENST00000474838 K7ENM7 598 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 TBCAO75347 108 aaKnown RBP17.66■□□□□ 0.42
ITGB5-205ENST00000474838 KRT18P05783 430 aaKnown RBP17.66■□□□□ 0.42
ITGB5-205ENST00000474838 C8AP07357 584 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 SYT1P21579 422 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 RPL9P32969 192 aaKnown RBP17.66■□□□□ 0.42
ITGB5-205ENST00000474838 OR1D2P34982 312 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 BRCC3P46736 316 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 RESTQ13127 1097 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 DHX8Q14562 1220 aaKnown RBP17.66■□□□□ 0.42
ITGB5-205ENST00000474838 MCM6Q14566 821 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 PTPAQ15257 358 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 PPM1LQ5SGD2 360 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 PRSS33Q8NF86 280 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 MYADMQ96S97 322 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 CCSER1Q9C0I3 900 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.66■□□□□ 0.42
ITGB5-205ENST00000474838 DUSP12Q9UNI6 340 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 CLIC4Q9Y696 253 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 CDY1Q9Y6F8 540 aa17.66■□□□□ 0.42
ITGB5-205ENST00000474838 I3L4J1 428 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 HNRNPDLO14979 420 aaKnown RBP17.65■□□□□ 0.42
ITGB5-205ENST00000474838 XYLBO75191 536 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 PIGRP01833 764 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 POU2F2P09086 479 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 CLTAP09496 248 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 AVPR2P30518 371 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 MATR3P43243 847 aaKnown RBP eCLIP17.65■□□□□ 0.42
ITGB5-205ENST00000474838 LIG4P49917 911 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 PTPN5P54829 565 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 SLC10A6Q3KNW5 377 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 SEZ6Q53EL9 994 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 IER5LQ5T953 404 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 GET4Q7L5D6 327 aaPredicted RBP17.65■□□□□ 0.42
ITGB5-205ENST00000474838 MYCT1Q8N699 235 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 C18orf25Q96B23 403 aaPredicted RBP17.65■□□□□ 0.42
ITGB5-205ENST00000474838 HAPLN2Q9GZV7 340 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 PLEKHA5Q9HAU0 1116 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 TBX20Q9UMR3 447 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 NUB1Q9Y5A7 615 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 TRIP11Q15643 1979 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 CITO14578 2027 aa17.65■□□□□ 0.42
ITGB5-205ENST00000474838 SYN3O14994 580 aa17.64■□□□□ 0.41
ITGB5-205ENST00000474838 TRAK2O60296 914 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms