RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 NAP1L5Q96NT1 182 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-206ENST00000474648 GAD1Q99259 594 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-206ENST00000474648 TUBGCP2Q9BSJ2 902 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 ASB7Q9H672 318 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 TOPORSQ9NS56 1045 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-206ENST00000474648 TAB2Q9NYJ8 693 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 CNTN3Q9P232 1028 aa10.86□□□□□ -0.67
COL8A1-206ENST00000474648 MAGEC2Q9UBF1 373 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-206ENST00000474648 SCN5AQ14524 2016 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 ARL5CA6NH57 179 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 PTGESO14684 152 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 EFCAB14O75071 495 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 IL18RAPO95256 599 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 C4BPAP04003 597 aaKnown RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 TRIM49P0CI25 452 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 TRIM49CP0CI26 452 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 FGFR1P11362 822 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 ACTN1P12814 892 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 KRT13P13646 458 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 MAGEA10P43363 369 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 MTIF2P46199 727 aaKnown RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 COPB1P53618 953 aaKnown RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 YARSP54577 528 aaKnown RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 WDR5P61964 334 aaKnown RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 TPM4P67936 248 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 DEFB103AP81534 67 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 FANCCQ00597 558 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 KCNH2Q12809 1159 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 SURF1Q15526 300 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 NAB2Q15742 525 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 MAN2A1Q16706 1144 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 VWA3BQ502W6 1294 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 RASIP1Q5U651 963 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 LMBRD2Q68DH5 695 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 JADE1Q6IE81 842 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 PSRC1Q6PGN9 363 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 NPAS4Q8IUM7 802 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 HACE1Q8IYU2 909 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 TMEM130Q8N3G9 435 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 OR5B17Q8NGF7 314 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 ZFP42Q96MM3 310 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 CASD1Q96PB1 797 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 CGRRF1Q99675 332 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 VPS16Q9H269 839 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 RSAD1Q9HA92 442 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 UBN1Q9NPG3 1134 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 INTS13Q9NVM9 706 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 CXXC1Q9P0U4 656 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-206ENST00000474648 PLAGL2Q9UPG8 496 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 PCDHB7Q9Y5E2 793 aa10.85□□□□□ -0.67
COL8A1-206ENST00000474648 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 H0YGN5 161 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 SNPHO15079 494 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 PMM2O15305 246 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 AMHP03971 560 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 NFICP08651 508 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 DLATP10515 647 aaKnown RBP10.84□□□□□ -0.67
COL8A1-206ENST00000474648 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-206ENST00000474648 GTF2H1P32780 548 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 MLH1P40692 756 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 GCLMP48507 274 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 GATMP50440 423 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 PPP2R3AQ06190 1150 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 NR1I3Q14994 352 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 C15orf39Q6ZRI6 1047 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 TMCO2Q7Z6W1 182 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-206ENST00000474648 WDR49Q8IV35 697 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 CXorf38Q8TB03 319 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 HELQQ8TDG4 1101 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 C18orf25Q96B23 403 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-206ENST00000474648 PPP1R10Q96QC0 940 aaKnown RBP10.84□□□□□ -0.67
COL8A1-206ENST00000474648 FNBP1Q96RU3 617 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 TSPAN18Q96SJ8 248 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 GDF15Q99988 308 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 TMEM117Q9H0C3 514 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 NDST4Q9H3R1 872 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 DERAQ9Y315 318 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 C2CD2Q9Y426 696 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL8A1-206ENST00000474648 TANC1Q9C0D5 1861 aa10.84□□□□□ -0.67
COL8A1-206ENST00000474648 TEX33O43247 280 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 DGKIO75912 1065 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 UPP2O95045 317 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 CST3P01034 146 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-206ENST00000474648 AFPP02771 609 aaKnown RBP10.83□□□□□ -0.68
COL8A1-206ENST00000474648 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-206ENST00000474648 TNNI1P19237 187 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 FMO5P49326 533 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 SCNN1GP51170 649 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 GUCY2FP51841 1108 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 SOX4Q06945 474 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-206ENST00000474648 DUOXA2Q1HG44 320 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 ZACNQ401N2 412 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 CBWD6Q4V339 395 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-206ENST00000474648 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms