RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 TNNC2P02585 160 aa21.33■■□□□ 1.01
SSR1-204ENST00000474597 MYCNP04198 464 aaPredicted RBP21.33■■□□□ 1.01
SSR1-204ENST00000474597 FGFR4P22455 802 aa21.33■■□□□ 1.01
SSR1-204ENST00000474597 CCND3P30281 292 aaPredicted RBP21.33■■□□□ 1.01
SSR1-204ENST00000474597 VEGFBP49765 207 aa21.33■■□□□ 1.01
SSR1-204ENST00000474597 PCBP1Q15365 356 aaKnown RBP eCLIP21.33■■□□□ 1.01
SSR1-204ENST00000474597 CXCL17Q6UXB2 119 aa21.33■■□□□ 1.01
SSR1-204ENST00000474597 SHC3Q92529 594 aa21.33■■□□□ 1.01
SSR1-204ENST00000474597 NAPGQ99747 312 aaPredicted RBP21.33■■□□□ 1.01
SSR1-204ENST00000474597 SEPT11Q9NVA2 429 aaKnown RBP21.33■■□□□ 1.01
SSR1-204ENST00000474597 DUSP10Q9Y6W6 482 aa21.33■■□□□ 1.01
SSR1-204ENST00000474597 HMGCRP04035 888 aa21.32■■□□□ 1
SSR1-204ENST00000474597 STAG3L1P0CL83 205 aa21.32■■□□□ 1
SSR1-204ENST00000474597 CXCL8P10145 99 aa21.32■■□□□ 1
SSR1-204ENST00000474597 TFAMQ00059 246 aaKnown RBP21.32■■□□□ 1
SSR1-204ENST00000474597 NCOA4Q13772 614 aa21.32■■□□□ 1
SSR1-204ENST00000474597 NAB2Q15742 525 aa21.32■■□□□ 1
SSR1-204ENST00000474597 ZNF710Q8N1W2 664 aa21.32■■□□□ 1
SSR1-204ENST00000474597 NME8Q8N427 588 aa21.32■■□□□ 1
SSR1-204ENST00000474597 U2AF1L4Q8WU68 220 aaKnown RBP21.32■■□□□ 1
SSR1-204ENST00000474597 MTMR12Q9C0I1 747 aa21.32■■□□□ 1
SSR1-204ENST00000474597 A0A1B0GUA9 196 aa21.32■■□□□ 1
SSR1-204ENST00000474597 DDX3XO00571 662 aaKnown RBP eCLIP21.32■■□□□ 15e-15■■□□□ 11.6
SSR1-204ENST00000474597 B4GALT4O60513 344 aa21.32■■□□□ 1
SSR1-204ENST00000474597 TACC1O75410 805 aa21.32■■□□□ 1
SSR1-204ENST00000474597 DARSP14868 501 aaKnown RBP21.32■■□□□ 1
SSR1-204ENST00000474597 NAP1L1P55209 391 aaKnown RBP21.32■■□□□ 1
SSR1-204ENST00000474597 DCAF4L1Q3SXM0 396 aa21.32■■□□□ 1
SSR1-204ENST00000474597 FAM71AQ8IYT1 594 aa21.32■■□□□ 1
SSR1-204ENST00000474597 ELMO3Q96BJ8 720 aa21.32■■□□□ 1
SSR1-204ENST00000474597 SCN10AQ9Y5Y9 1956 aa21.31■■□□□ 1
SSR1-204ENST00000474597 GNRH1P01148 92 aa21.31■■□□□ 1
SSR1-204ENST00000474597 KRT5P13647 590 aa21.31■■□□□ 1
SSR1-204ENST00000474597 NKX3-2P78367 333 aa21.31■■□□□ 1
SSR1-204ENST00000474597 POU5F1Q01860 360 aaKnown RBP21.31■■□□□ 1
SSR1-204ENST00000474597 TRPC3Q13507 836 aa21.31■■□□□ 1
SSR1-204ENST00000474597 TAF2Q6P1X5 1199 aa21.31■■□□□ 1
SSR1-204ENST00000474597 TRAPPC11Q7Z392 1133 aa21.31■■□□□ 1
SSR1-204ENST00000474597 GLYCTKQ8IVS8 523 aa21.31■■□□□ 1
SSR1-204ENST00000474597 TMEM192Q8IY95 271 aa21.31■■□□□ 1
SSR1-204ENST00000474597 ERO1AQ96HE7 468 aa21.31■■□□□ 1
SSR1-204ENST00000474597 ALS2CR12Q96Q35 445 aa21.31■■□□□ 1
SSR1-204ENST00000474597 AGPAT1Q99943 283 aa21.31■■□□□ 1
SSR1-204ENST00000474597 L2HGDHQ9H9P8 463 aa21.31■■□□□ 1
SSR1-204ENST00000474597 CDHR5Q9HBB8 845 aa21.31■■□□□ 1
SSR1-204ENST00000474597 HOXC8P31273 242 aa21.3■■□□□ 1
SSR1-204ENST00000474597 NOP14P78316 857 aaKnown RBP21.3■■□□□ 1
SSR1-204ENST00000474597 ARHGEF6Q15052 776 aa21.3■■□□□ 1
SSR1-204ENST00000474597 NBPF20Q3BBV1 942 aa21.3■■□□□ 1
SSR1-204ENST00000474597 SPOPLQ6IQ16 392 aa21.3■■□□□ 1
SSR1-204ENST00000474597 TRIM58Q8NG06 486 aa21.3■■□□□ 1
SSR1-204ENST00000474597 CYP26A1O43174 497 aa21.29■■□□□ 1
SSR1-204ENST00000474597 ADAMTS4O75173 837 aa21.29■■□□□ 1
SSR1-204ENST00000474597 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
SSR1-204ENST00000474597 TBXAS1P24557 533 aaPredicted RBP21.29■■□□□ 1
SSR1-204ENST00000474597 PDE6CP51160 858 aa21.29■■□□□ 1
SSR1-204ENST00000474597 FAM47CQ5HY64 1035 aa21.29■■□□□ 1
SSR1-204ENST00000474597 NOTUMQ6P988 496 aa21.29■■□□□ 1
SSR1-204ENST00000474597 RNF10Q8N5U6 811 aaKnown RBP21.29■■□□□ 1
SSR1-204ENST00000474597 LNX1Q8TBB1 728 aaPredicted RBP21.29■■□□□ 1
SSR1-204ENST00000474597 ACAP3Q96P50 834 aa21.29■■□□□ 1
SSR1-204ENST00000474597 NOX5Q96PH1 765 aa21.29■■□□□ 1
SSR1-204ENST00000474597 GTF2IRD1Q9UHL9 959 aa21.29■■□□□ 1
SSR1-204ENST00000474597 CITO14578 2027 aa21.29■■□□□ 1
SSR1-204ENST00000474597 M0QZ92 97 aa21.29■■□□□ 1
SSR1-204ENST00000474597 SLU7O95391 586 aaKnown RBP21.29■■□□□ 1
SSR1-204ENST00000474597 MOCS3O95396 460 aa21.29■■□□□ 1
SSR1-204ENST00000474597 AXLP30530 894 aa21.29■■□□□ 1
SSR1-204ENST00000474597 SNX17Q15036 470 aa21.29■■□□□ 1
SSR1-204ENST00000474597 KCNA10Q16322 511 aa21.29■■□□□ 1
SSR1-204ENST00000474597 EFCAB13Q8IY85 973 aa21.29■■□□□ 1
SSR1-204ENST00000474597 SLC30A5Q8TAD4 765 aa21.29■■□□□ 1
SSR1-204ENST00000474597 CCDC94Q9BW85 323 aaPredicted RBP21.29■■□□□ 1
SSR1-204ENST00000474597 PACSIN1Q9BY11 444 aa21.29■■□□□ 1
SSR1-204ENST00000474597 ASB7Q9H672 318 aa21.29■■□□□ 1
SSR1-204ENST00000474597 ATP8B3O60423 1300 aa21.28■■□□□ 1
SSR1-204ENST00000474597 MYH10P35580 1976 aa21.28■■□□□ 1
SSR1-204ENST00000474597 LACTBL1A8MY62 500 aa21.28■■□□□ 1
SSR1-204ENST00000474597 SGPL1O95470 568 aa21.28■■□□□ 1
SSR1-204ENST00000474597 NPTXRO95502 500 aa21.28■■□□□ 1
SSR1-204ENST00000474597 ASGR1P07306 291 aa21.28■■□□□ 1
SSR1-204ENST00000474597 H2AFZP0C0S5 128 aa21.28■■□□□ 1
SSR1-204ENST00000474597 CRYBB1P53674 252 aaPredicted RBP21.28■■□□□ 1
SSR1-204ENST00000474597 CUL2Q13617 745 aa21.28■■□□□ 1
SSR1-204ENST00000474597 SLC27A1Q6PCB7 646 aa21.28■■□□□ 1
SSR1-204ENST00000474597 H2AFVQ71UI9 128 aa21.28■■□□□ 1
SSR1-204ENST00000474597 RSPH3Q86UC2 560 aa21.28■■□□□ 1
SSR1-204ENST00000474597 RPUSD2Q8IZ73 545 aaKnown RBP21.28■■□□□ 1
SSR1-204ENST00000474597 PCSK9Q8NBP7 692 aaKnown RBP21.28■■□□□ 1
SSR1-204ENST00000474597 DHX38Q92620 1227 aaKnown RBP21.28■■□□□ 1
SSR1-204ENST00000474597 SYT11Q9BT88 431 aa21.28■■□□□ 1
SSR1-204ENST00000474597 FKTNO75072 461 aa21.27■■□□□ 1
SSR1-204ENST00000474597 CST3P01034 146 aaPredicted RBP21.27■■□□□ 1
SSR1-204ENST00000474597 GTF2F1P35269 517 aaKnown RBP eCLIP21.27■■□□□ 1
SSR1-204ENST00000474597 TUBB2AQ13885 445 aa21.27■■□□□ 1
SSR1-204ENST00000474597 SGSM1Q2NKQ1 1148 aa21.27■■□□□ 1
SSR1-204ENST00000474597 EPS8L1Q8TE68 723 aa21.27■■□□□ 1
SSR1-204ENST00000474597 PXYLP1Q8TE99 480 aa21.27■■□□□ 1
SSR1-204ENST00000474597 SLC20A1Q8WUM9 679 aa21.27■■□□□ 1
SSR1-204ENST00000474597 TUBB2BQ9BVA1 445 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms