RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
CDPF1-205ENST00000474256 GRIN1Q05586 938 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 ZPBP2Q6X784 338 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 C3orf58Q8NDZ4 430 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 CALML4Q96GE6 196 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
CDPF1-205ENST00000474256 PRRX2Q99811 253 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 KCNK12Q9HB15 430 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 EPS15L1Q9UBC2 864 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 MTRRQ9UBK8 725 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 ODF2LQ9ULJ1 636 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 DENND4AQ7Z401 1863 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 H0YCG3 227 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 TRAPPC3O43617 180 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 PDCP20941 246 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 VCPP55072 806 aaKnown RBP17.28■□□□□ 0.36
CDPF1-205ENST00000474256 MCL1Q07820 350 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 TDGQ13569 410 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 RAB33AQ14088 237 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 NOLC1Q14978 699 aaKnown RBP eCLIP17.28■□□□□ 0.36
CDPF1-205ENST00000474256 PRSS33Q8NF86 280 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 REEP2Q9BRK0 252 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 PIDD1Q9HB75 910 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 IGSF9Q9P2J2 1179 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 ANKFY1Q9P2R3 1169 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 BACE2Q9Y5Z0 518 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 PLXNA3P51805 1871 aa17.28■□□□□ 0.36
CDPF1-205ENST00000474256 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
CDPF1-205ENST00000474256 HARSP12081 509 aaKnown RBP17.27■□□□□ 0.36
CDPF1-205ENST00000474256 PLCG1P19174 1290 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 TKTP29401 623 aaKnown RBP17.27■□□□□ 0.36
CDPF1-205ENST00000474256 HOXA9P31269 272 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 GBP2P32456 591 aaPredicted RBP17.27■□□□□ 0.36
CDPF1-205ENST00000474256 OR1D2P34982 312 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 BRCC3P46736 316 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 ZNF131P52739 623 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 SLC10A6Q3KNW5 377 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 RSPO2Q6UXX9 243 aaPredicted RBP17.27■□□□□ 0.36
CDPF1-205ENST00000474256 HAUS6Q7Z4H7 955 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 GPBP1Q86WP2 473 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 MYADMQ96S97 322 aa17.27■□□□□ 0.36
CDPF1-205ENST00000474256 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDPF1-205ENST00000474256 ZDBF2Q9HCK1 2354 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 PODXLO00592 558 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 CLDN3O15551 220 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 C8AP07357 584 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 HNRNPA1P09651 372 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDPF1-205ENST00000474256 SCP2P22307 547 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 RPL9P32969 192 aaKnown RBP17.26■□□□□ 0.35
CDPF1-205ENST00000474256 TCF15Q12870 199 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 MCM6Q14566 821 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
CDPF1-205ENST00000474256 PTPAQ15257 358 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 SEZ6Q53EL9 994 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 LIN9Q5TKA1 542 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 ANKS3Q6ZW76 656 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 RAD54LQ92698 747 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 C18orf25Q96B23 403 aaPredicted RBP17.26■□□□□ 0.35
CDPF1-205ENST00000474256 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 CCSER1Q9C0I3 900 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 HAPLN2Q9GZV7 340 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 DUSP12Q9UNI6 340 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 CDY1Q9Y6F8 540 aa17.26■□□□□ 0.35
CDPF1-205ENST00000474256 I3L4J1 428 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 POU2F2P09086 479 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 LAMP2P13473 410 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 SYT1P21579 422 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 NUBP1P53384 320 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 PTPN5P54829 565 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 DHX8Q14562 1220 aaKnown RBP17.25■□□□□ 0.35
CDPF1-205ENST00000474256 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 PPM1LQ5SGD2 360 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 RTL10Q7L3V2 364 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 NXPE3Q969Y0 559 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
CDPF1-205ENST00000474256 PLEKHA5Q9HAU0 1116 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 PARVGQ9HBI0 331 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 TBX20Q9UMR3 447 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 CLIC4Q9Y696 253 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 C2orf16Q68DN1 1984 aa17.25■□□□□ 0.35
CDPF1-205ENST00000474256 WDFY4Q6ZS81 3184 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 SYN3O14994 580 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 TRAK2O60296 914 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 FAM13AO94988 1023 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 PIGRP01833 764 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 CLTAP09496 248 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 DDIT3P35638 169 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 RESTQ13127 1097 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 AXDND1Q5T1B0 1012 aaPredicted RBP17.24■□□□□ 0.35
CDPF1-205ENST00000474256 SLC8B1Q6J4K2 584 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 GET4Q7L5D6 327 aaPredicted RBP17.24■□□□□ 0.35
CDPF1-205ENST00000474256 GRASPQ7Z6J2 395 aaPredicted RBP17.24■□□□□ 0.35
CDPF1-205ENST00000474256 MYCT1Q8N699 235 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 RASSF8Q8NHQ8 419 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 SLC7A14Q8TBB6 771 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 RSAD2Q8WXG1 361 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 LARP4BQ92615 738 aaKnown RBP17.24■□□□□ 0.35
CDPF1-205ENST00000474256 FIZ1Q96SL8 496 aa17.24■□□□□ 0.35
CDPF1-205ENST00000474256 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms