RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 KYAT1Q16773 422 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 UPP1Q16831 310 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 HERC4Q5GLZ8 1057 aaPredicted RBP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 PDXDC1Q6P996 788 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 PRSS55Q6UWB4 352 aaPredicted RBP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 GPR149Q86SP6 731 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 CEP57Q86XR8 500 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 LNX1Q8TBB1 728 aaPredicted RBP12.22□□□□□ -0.45
CKS1B-206ENST00000474215 HDAC7Q8WUI4 952 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 PIK3R5Q8WYR1 880 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 DDX12PQ92771 950 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 FIZ1Q96SL8 496 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 HAPLN2Q9GZV7 340 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 ST6GALNAC4Q9H4F1 302 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 POMKQ9H5K3 350 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 PLEKHA5Q9HAU0 1116 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 GOLGA2P5Q9HBQ8 144 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 CNTN3Q9P232 1028 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 MUTYHQ9UIF7 546 aa12.22□□□□□ -0.45
CKS1B-206ENST00000474215 A0A087X0B3 334 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 A0A0B4J269 797 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 MYMKA6NI61 221 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 YEATS4O95619 227 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 F13A1P00488 732 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 SPATA31D3P0C874 917 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 RPL17P18621 184 aaKnown RBP12.21□□□□□ -0.45
CKS1B-206ENST00000474215 FGFR3P22607 806 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 IGFBP6P24592 240 aaPredicted RBP12.21□□□□□ -0.45
CKS1B-206ENST00000474215 RPL9P32969 192 aaKnown RBP12.21□□□□□ -0.45
CKS1B-206ENST00000474215 STAT6P42226 847 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 ZC2HC1CQ53FD0 456 aaPredicted RBP12.21□□□□□ -0.45
CKS1B-206ENST00000474215 LILRA6Q6PI73 481 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 CD300LGQ6UXG3 332 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.45
CKS1B-206ENST00000474215 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 SPATA31D4Q6ZUB0 917 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 ZNF720Q7Z2F6 126 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 CMASQ8NFW8 434 aaPredicted RBP12.21□□□□□ -0.45
CKS1B-206ENST00000474215 C18orf25Q96B23 403 aaPredicted RBP12.21□□□□□ -0.45
CKS1B-206ENST00000474215 DNAJC19Q96DA6 116 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 CLSTN3Q9BQT9 956 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 LRFN3Q9BTN0 628 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 PLEKHA4Q9H4M7 779 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 C11orf16Q9NQ32 467 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 MAN1C1Q9NR34 630 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 SEL1LQ9UBV2 794 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 NR2E1Q9Y466 385 aa12.21□□□□□ -0.45
CKS1B-206ENST00000474215 CCDC195A0A1B0GUA6 201 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 TTC26A0AVF1 554 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 FAM86C2PA6NEL3 165 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 OGTO15294 1046 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 TGM5O43548 720 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 CUTAO60888 179 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 MYBP10242 640 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 GAP43P17677 238 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 PSMD5Q16401 504 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
CKS1B-206ENST00000474215 ATL3Q6DD88 541 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 CYP26C1Q6V0L0 522 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
CKS1B-206ENST00000474215 SFR1Q86XK3 245 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 MAP4K3Q8IVH8 894 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 GLYCTKQ8IVS8 523 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 PDILTQ8N807 584 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 C3orf58Q8NDZ4 430 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 FEZF2Q8TBJ5 459 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 EDAQ92838 391 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 MSTO1Q9BUK6 570 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 TRIOO75962 3097 aa12.2□□□□□ -0.46
CKS1B-206ENST00000474215 ANKRD63C9JTQ0 380 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 I3L4J1 428 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 PODXLO00592 558 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 FAM189A1O60320 539 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 CXCL8P10145 99 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 COL9A1P20849 921 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 SP100P23497 879 aaPredicted RBP12.19□□□□□ -0.46
CKS1B-206ENST00000474215 TNFSF9P41273 254 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 BRCC3P46736 316 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 PKP1Q13835 747 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 ZBTB6Q15916 424 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 SLFN12LQ6IEE8 588 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 SLC39A4Q6P5W5 647 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 KREMEN2Q8NCW0 462 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 HVCN1Q96D96 273 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 TSPAN18Q96SJ8 248 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 STRA6Q9BX79 667 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 RHOBTB2Q9BYZ6 727 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 MRPL44Q9H9J2 332 aaKnown RBP12.19□□□□□ -0.46
CKS1B-206ENST00000474215 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 USTQ9Y2C2 406 aa12.19□□□□□ -0.46
CKS1B-206ENST00000474215 LACTBL1A8MY62 500 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 PRR33A8MZF0 331 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 C2CD4DB7Z1M9 353 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 ADAM12O43184 909 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms