RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NPTX2P47972 431 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 PRUNE1Q86TP1 453 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 TMEM161BQ8NDZ6 487 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 SYTL5Q8TDW5 730 aaPredicted RBP22.54■■□□□ 1.2
COL18A1-207ENST00000473212 UBIAD1Q9Y5Z9 338 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 FSCN2O14926 492 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 KRT5P13647 590 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 ALCAMQ13740 583 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 STYK1Q6J9G0 422 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 FAM160B2Q86V87 743 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 SERPINB12Q96P63 405 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 TBX20Q9UMR3 447 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 SYNPO2Q9UMS6 1093 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 ADGRA3Q8IWK6 1321 aa22.54■■□□□ 1.2
COL18A1-207ENST00000473212 DENND3A2RUS2 1198 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 RPS6P62753 249 aaKnown RBP22.53■■□□□ 1.2
COL18A1-207ENST00000473212 KCNJ2P63252 427 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 CDR2Q01850 454 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 NUGGCQ68CJ6 796 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 RHBDF2Q6PJF5 856 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 GDAP1Q8TB36 358 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 CPA5Q8WXQ8 436 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 CFAP73A6NFT4 308 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 CFHP08603 1231 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 MAPTP10636 758 aaKnown RBP22.53■■□□□ 1.2
COL18A1-207ENST00000473212 KYNUQ16719 465 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 KRT39Q6A163 491 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 RSBN1LQ6PCB5 846 aaPredicted RBP22.53■■□□□ 1.2
COL18A1-207ENST00000473212 ANO5Q75V66 913 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 ANAPC7Q9UJX3 599 aa22.53■■□□□ 1.2
COL18A1-207ENST00000473212 R3HDM2Q9Y2K5 976 aaKnown RBP22.53■■□□□ 1.2
COL18A1-207ENST00000473212 NCKAP1LP55160 1127 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 WNT7BP56706 349 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 NCALDP61601 193 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 SP4Q02446 784 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 ACCSLQ4AC99 568 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 SV2AQ7L0J3 742 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 SLCO2A1Q92959 643 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 WNK4Q96J92 1243 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 ECT2Q9H8V3 914 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 COL4A5P29400 1685 aa22.52■■□□□ 1.2
COL18A1-207ENST00000473212 TESPA1A2RU30 521 aaPredicted RBP22.52■■□□□ 1.19
COL18A1-207ENST00000473212 GH1P01241 217 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 ITIH2P19823 946 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 ITGA8P53708 1063 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 ADCY1Q08828 1119 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 SPDYE2Q495Y8 402 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 TMEM174Q8WUU8 243 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 POMGNT1Q8WZA1 660 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 HEMGNQ9BXL5 484 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 ATP6V0A4Q9HBG4 840 aa22.52■■□□□ 1.19
COL18A1-207ENST00000473212 ZNF277Q9NRM2 450 aaPredicted RBP22.52■■□□□ 1.19
COL18A1-207ENST00000473212 LOXHD1Q8IVV2 1947 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 TTC4O95801 387 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 MPP2Q14168 576 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 SEPT14Q6ZU15 432 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 SNF8Q96H20 258 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 RAB20Q9NX57 234 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 SUN1O94901 812 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 RPSAP08865 295 aaKnown RBP22.51■■□□□ 1.19
COL18A1-207ENST00000473212 NQO1P15559 274 aaKnown RBP22.51■■□□□ 1.19
COL18A1-207ENST00000473212 IVDP26440 423 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 ZKSCAN8Q15776 578 aaPredicted RBP22.51■■□□□ 1.19
COL18A1-207ENST00000473212 ACAD10Q6JQN1 1059 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 PLVAPQ9BX97 442 aa22.51■■□□□ 1.19
COL18A1-207ENST00000473212 COL2A1P02458 1487 aaPredicted RBP22.51■■□□□ 1.19
COL18A1-207ENST00000473212 MAPK13O15264 365 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 RRM1P23921 792 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 MAPK4P31152 587 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 TNIP1Q15025 636 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 PGM5Q15124 567 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 PCNX4Q63HM2 1172 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 SCARA3Q6AZY7 606 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 SPOPLQ6IQ16 392 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 TEX2Q8IWB9 1127 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 FBXL13Q8NEE6 735 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 STAMBPL1Q96FJ0 436 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 TBK1Q9UHD2 729 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 PMM2O15305 246 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 THAP12O43422 761 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 GJB6O95452 261 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 BRAFP15056 766 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 ATP5DP30049 168 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 GALNTL6Q49A17 601 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 CYP4X1Q8N118 509 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 NT5C1BQ96P26 610 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 GMLQ99445 158 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 L3MBTL1Q9Y468 752 aa22.5■■□□□ 1.19
COL18A1-207ENST00000473212 MROH7Q68CQ1 1323 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 PCNTO95613 3336 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 RIPK1Q13546 671 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 TLDC1Q6P9B6 456 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 ANKS1BQ7Z6G8 1248 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 CKAP2Q8WWK9 683 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 TMEM8AQ9HCN3 771 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 IGF2BP3O00425 579 aaKnown RBP eCLIP22.49■■□□□ 1.19
COL18A1-207ENST00000473212 ZNF862O60290 1169 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 ALDH5A1P51649 535 aaPredicted RBP22.49■■□□□ 1.19
COL18A1-207ENST00000473212 GPC3P51654 580 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 PTK6Q13882 451 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms