RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 CLDN3O15551 220 aa22.71■■□□□ 1.23
EPHB3-202ENST00000473079 RFPL2O75678 378 aa22.71■■□□□ 1.23
EPHB3-202ENST00000473079 CACNB1Q02641 598 aaPredicted RBP22.71■■□□□ 1.23
EPHB3-202ENST00000473079 MTMR3Q13615 1198 aa22.71■■□□□ 1.23
EPHB3-202ENST00000473079 NOLC1Q14978 699 aaKnown RBP eCLIP22.71■■□□□ 1.23
EPHB3-202ENST00000473079 PARVGQ9HBI0 331 aa22.71■■□□□ 1.23
EPHB3-202ENST00000473079 LIMD1Q9UGP4 676 aa22.71■■□□□ 1.23
EPHB3-202ENST00000473079 SRPRBQ9Y5M8 271 aaKnown RBP22.71■■□□□ 1.23
EPHB3-202ENST00000473079 K7ELQ4 463 aaPredicted RBP22.7■■□□□ 1.22
EPHB3-202ENST00000473079 MEFVO15553 781 aaPredicted RBP22.7■■□□□ 1.22
EPHB3-202ENST00000473079 ZMYND10O75800 440 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 IGFBP6P24592 240 aaPredicted RBP22.7■■□□□ 1.22
EPHB3-202ENST00000473079 RPL9P32969 192 aaKnown RBP22.7■■□□□ 1.22
EPHB3-202ENST00000473079 SOX4Q06945 474 aaPredicted RBP22.7■■□□□ 1.22
EPHB3-202ENST00000473079 MCM6Q14566 821 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 GLYCTKQ8IVS8 523 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 RASSF8Q8NHQ8 419 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 LARP4BQ92615 738 aaKnown RBP22.7■■□□□ 1.22
EPHB3-202ENST00000473079 PRKD2Q9BZL6 878 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 GOLGA2P5Q9HBQ8 144 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 FBXO2Q9UK22 296 aaPredicted RBP22.7■■□□□ 1.22
EPHB3-202ENST00000473079 FBXW11Q9UKB1 542 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 PLXNA3P51805 1871 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 DENND4AQ7Z401 1863 aa22.7■■□□□ 1.22
EPHB3-202ENST00000473079 FAM13AO94988 1023 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 PIGRP01833 764 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 ABCD1P33897 745 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 RAB33AQ14088 237 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 DHX8Q14562 1220 aaKnown RBP22.69■■□□□ 1.22
EPHB3-202ENST00000473079 SLC10A6Q3KNW5 377 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 FBXL6Q8N531 539 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 MYCT1Q8N699 235 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 C3orf58Q8NDZ4 430 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 SMG7Q92540 1137 aaKnown RBP22.69■■□□□ 1.22
EPHB3-202ENST00000473079 STAMQ92783 540 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 EPSTI1Q96J88 318 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 ZSCAN16Q9H4T2 348 aaPredicted RBP22.69■■□□□ 1.22
EPHB3-202ENST00000473079 PLEKHA5Q9HAU0 1116 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 ANKFY1Q9P2R3 1169 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 MTRRQ9UBK8 725 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 TBX20Q9UMR3 447 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 MTMR6Q9Y217 621 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 BACE2Q9Y5Z0 518 aa22.69■■□□□ 1.22
EPHB3-202ENST00000473079 CLUHO75153 1309 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 TRAK2O60296 914 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 CLTAP09496 248 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 HNRNPA1P09651 372 aaKnown RBP eCLIP22.68■■□□□ 1.22
EPHB3-202ENST00000473079 KYAT1Q16773 422 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 USP49Q70CQ1 688 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 SNX21Q969T3 373 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 HAPLN2Q9GZV7 340 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 CCDC39Q9UFE4 941 aa22.68■■□□□ 1.22
EPHB3-202ENST00000473079 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.68■■□□□ 1.22
EPHB3-202ENST00000473079 PODXLO00592 558 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 KRT18P05783 430 aaKnown RBP22.67■■□□□ 1.22
EPHB3-202ENST00000473079 ASGR2P07307 311 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 MYBP10242 640 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 HARSP12081 509 aaKnown RBP22.67■■□□□ 1.22
EPHB3-202ENST00000473079 MARCKSP29966 332 aaPredicted RBP22.67■■□□□ 1.22
EPHB3-202ENST00000473079 HOXA9P31269 272 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 FAM173BQ6P4H8 233 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 ANKS3Q6ZW76 656 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 RTL10Q7L3V2 364 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 FIZ1Q96SL8 496 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 PIDD1Q9HB75 910 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 STK17AQ9UEE5 414 aa22.67■■□□□ 1.22
EPHB3-202ENST00000473079 ADAM12O43184 909 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 STX6O43752 255 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 N4BP1O75113 896 aaKnown RBP22.66■■□□□ 1.22
EPHB3-202ENST00000473079 TKTP29401 623 aaKnown RBP22.66■■□□□ 1.22
EPHB3-202ENST00000473079 OR1D2P34982 312 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 BRCC3P46736 316 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 LIG4P49917 911 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 GTF2BQ00403 316 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 SLC39A14Q15043 492 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 UVSSAQ2YD98 709 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 SEZ6Q53EL9 994 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 SUGP1Q8IWZ8 645 aaKnown RBP22.66■■□□□ 1.22
EPHB3-202ENST00000473079 BICD1Q96G01 975 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 ST6GALNAC4Q9H4F1 302 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.66■■□□□ 1.22
EPHB3-202ENST00000473079 IGSF9Q9P2J2 1179 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 EPS15L1Q9UBC2 864 aa22.66■■□□□ 1.22
EPHB3-202ENST00000473079 MTCL1Q9Y4B5 1905 aaKnown RBP22.65■■□□□ 1.22
EPHB3-202ENST00000473079 TTC26A0AVF1 554 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 SYN3O14994 580 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 TBCAO75347 108 aaKnown RBP22.65■■□□□ 1.22
EPHB3-202ENST00000473079 ADRB2P07550 413 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 POU2F2P09086 479 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 ZBTB6Q15916 424 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 SPECC1Q5M775 1068 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 LIN9Q5TKA1 542 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 RSPO2Q6UXX9 243 aaPredicted RBP22.65■■□□□ 1.22
EPHB3-202ENST00000473079 C18orf25Q96B23 403 aaPredicted RBP22.65■■□□□ 1.22
EPHB3-202ENST00000473079 TSPAN18Q96SJ8 248 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 C2orf16Q68DN1 1984 aa22.65■■□□□ 1.22
EPHB3-202ENST00000473079 MYH11P35749 1972 aa22.64■■□□□ 1.21
EPHB3-202ENST00000473079 I3L4J1 428 aa22.64■■□□□ 1.21
EPHB3-202ENST00000473079 K7ENM7 598 aa22.64■■□□□ 1.21
EPHB3-202ENST00000473079 HNRNPDLO14979 420 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms