RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 DNAJC7Q99615 494 aa8.13□□□□□ -1.11
SCAF4-205ENST00000472318 ADAM7Q9H2U9 754 aa8.13□□□□□ -1.11
SCAF4-205ENST00000472318 BCAS3Q9H6U6 928 aa8.13□□□□□ -1.11
SCAF4-205ENST00000472318 KANSL2Q9H9L4 492 aa8.13□□□□□ -1.11
SCAF4-205ENST00000472318 MRVI1Q9Y6F6 885 aa8.13□□□□□ -1.11
SCAF4-205ENST00000472318 CACNA1BQ00975 2339 aa8.13□□□□□ -1.11
SCAF4-205ENST00000472318 RLFQ13129 1914 aa8.13□□□□□ -1.11
SCAF4-205ENST00000472318 KMT2BQ9UMN6 2715 aaPredicted RBP8.12□□□□□ -1.11
SCAF4-205ENST00000472318 AK9Q5TCS8 1911 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 DDTLA6NHG4 134 aaPredicted RBP8.12□□□□□ -1.11
SCAF4-205ENST00000472318 EPOPA6NHQ4 379 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 TIMP1P01033 207 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 MYL1P05976 194 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 ALADP13716 330 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 MCCP23508 829 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 TMPOP42166 694 aaKnown RBP8.12□□□□□ -1.11
SCAF4-205ENST00000472318 GCKRQ14397 625 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 HLTFQ14527 1009 aaKnown RBP eCLIP8.12□□□□□ -1.11
SCAF4-205ENST00000472318 BRDTQ58F21 947 aaPredicted RBP8.12□□□□□ -1.11
SCAF4-205ENST00000472318 GTF2IRD2BQ6EKJ0 949 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 MFSD5Q6N075 450 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 KSR2Q6VAB6 950 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 GTF2IRD2Q86UP8 949 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 RAVER1Q8IY67 606 aaKnown RBP8.12□□□□□ -1.11
SCAF4-205ENST00000472318 PKNOX2Q96KN3 472 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 USP40Q9NVE5 1235 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 FRMPD3Q5JV73 1810 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 CHD8Q9HCK8 2581 aa8.12□□□□□ -1.11
SCAF4-205ENST00000472318 MYO9BQ13459 2157 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 PLXNA1Q9UIW2 1896 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 BAHCC1Q9P281 2608 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CCER2I3L3R5 266 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 TSPAN6O43657 245 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 DDX58O95786 925 aaKnown RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 THBDP07204 575 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CSF2RAP15509 400 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CD53P19397 219 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 KCNC1P48547 511 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 RGS3P49796 1198 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 EPHB1P54762 984 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 IRX3P78415 501 aaPredicted RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 POU5F1BQ06416 359 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CYP4F3Q08477 520 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 LMOD3Q0VAK6 560 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 IFRD2Q12894 506 aaPredicted RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 IFIT5Q13325 482 aaKnown RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 RRP1BQ14684 758 aaKnown RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 NFE2Q16621 373 aaPredicted RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 SKOR2Q2VWA4 1001 aaPredicted RBP8.11□□□□□ -1.11
SCAF4-205ENST00000472318 FAM47AQ5JRC9 791 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 SYCP2LQ5T4T6 812 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 ADGRG2Q8IZP9 1017 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 PLEKHO2Q8TD55 490 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 PAGR1Q9BTK6 254 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CCDC113Q9H0I3 377 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CERS4Q9HA82 394 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 ARNT2Q9HBZ2 717 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 GPRC5CQ9NQ84 441 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CYP26B1Q9NR63 512 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 CNNM1Q9NRU3 951 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 TMEM260Q9NX78 707 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 TBX21Q9UL17 535 aa8.11□□□□□ -1.11
SCAF4-205ENST00000472318 PKD1L2Q7Z442 2459 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 PRRC2BQ5JSZ5 2229 aaKnown RBP8.1□□□□□ -1.11
SCAF4-205ENST00000472318 PTPRFP10586 1907 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 A0A1B0GTL3 188 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 NOP56O00567 594 aaKnown RBP8.1□□□□□ -1.11
SCAF4-205ENST00000472318 SEPT4O43236 478 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 DCXO43602 365 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 CNMDO75829 334 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 HOXC6P09630 235 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 HOXA7P31268 230 aaPredicted RBP8.1□□□□□ -1.11
SCAF4-205ENST00000472318 TCF15Q12870 199 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 PPIGQ13427 754 aaKnown RBP eCLIP8.1□□□□□ -1.118e-9■■□□□ 13.7
SCAF4-205ENST00000472318 EPHA10Q5JZY3 1008 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 PRAMEF19Q5SWL8 479 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 LDHAL6AQ6ZMR3 332 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 PCGF5Q86SE9 256 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 DCP2Q8IU60 420 aaKnown RBP8.1□□□□□ -1.11
SCAF4-205ENST00000472318 SMARCC2Q8TAQ2 1214 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 USP33Q8TEY7 942 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 HNRNPLLQ8WVV9 542 aaKnown RBP8.1□□□□□ -1.11
SCAF4-205ENST00000472318 ANAPC4Q9UJX5 808 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 ATP8A1Q9Y2Q0 1164 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 ZNF318Q5VUA4 2279 aa8.1□□□□□ -1.11
SCAF4-205ENST00000472318 MAST3O60307 1309 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 ZNF521Q96K83 1311 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 PHIPQ8WWQ0 1821 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 SMAD7O15105 426 aaKnown RBP8.09□□□□□ -1.11
SCAF4-205ENST00000472318 FRAT2O75474 233 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-205ENST00000472318 FOSP01100 380 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-205ENST00000472318 FUCA1P04066 466 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 NTRK1P04629 796 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 IL9P15248 144 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 NEXNQ0ZGT2 675 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 TNNI3KQ59H18 835 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 PSRC1Q6PGN9 363 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-205ENST00000472318 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms