RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CRACR2AQ9BSW2 395 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 RSAD1Q9HA92 442 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 CNTN3Q9P232 1028 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 PLAGL2Q9UPG8 496 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 ANK1P16157 1881 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 ARL5CA6NH57 179 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 OFD1O75665 1012 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 ADCY5O95622 1261 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 PFKMP08237 780 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 GATMP50440 423 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 ENPEPQ07075 957 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 CLLU1OSQ5K130 101 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 TMCO2Q7Z6W1 182 aaPredicted RBP20.78■□□□□ 0.92
PSPC1-203ENST00000471658 WDR49Q8IV35 697 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 CRIPAKQ8N1N5 446 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 C18orf25Q96B23 403 aaPredicted RBP20.78■□□□□ 0.92
PSPC1-203ENST00000471658 MTMR12Q9C0I1 747 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 TMEM161AQ9NX61 479 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 PCDHB7Q9Y5E2 793 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 LTBP2Q14767 1821 aa20.78■□□□□ 0.92
PSPC1-203ENST00000471658 ABHD14A-ACY1A0A1B0GW23 586 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 UPP2O95045 317 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 FGBP02675 491 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 SCNN1GP51170 649 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 DEFB103AP81534 67 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 TMEM132DQ14C87 1099 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 TMEM240Q5SV17 173 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 TDRD10Q5VZ19 366 aaKnown RBP20.77■□□□□ 0.92
PSPC1-203ENST00000471658 USP37Q86T82 979 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 CD302Q8IX05 232 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 HELQQ8TDG4 1101 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 ELMO3Q96BJ8 720 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.77■□□□□ 0.921e-23■□□□□ 11
PSPC1-203ENST00000471658 INPP5FQ9Y2H2 1132 aa20.77■□□□□ 0.92
PSPC1-203ENST00000471658 TRIP11Q15643 1979 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 KCNE1P15382 129 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 KLK7P49862 253 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 KCNMA1Q12791 1236 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 ZBTB6Q15916 424 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 DUOXA2Q1HG44 320 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 C15orf39Q6ZRI6 1047 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 ELAC1Q9H777 363 aaKnown RBP20.76■□□□□ 0.91
PSPC1-203ENST00000471658 TMEM8AQ9HCN3 771 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.76■□□□□ 0.911e-6■■■■■ 81.9
PSPC1-203ENST00000471658 TUBGCP4Q9UGJ1 667 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 LRFN2Q9ULH4 789 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 CITO14578 2027 aa20.76■□□□□ 0.91
PSPC1-203ENST00000471658 MICAL3Q7RTP6 2002 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 CBFA2T2O43439 604 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 STX10O60499 249 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 VNN1O95497 513 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 CST3P01034 146 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-203ENST00000471658 POMCP01189 267 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 TMEM191BP0C7N4 346 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 GTF2H1P32780 548 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 MXI1P50539 228 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 WDR5P61964 334 aaKnown RBP20.75■□□□□ 0.91
PSPC1-203ENST00000471658 MYL7Q01449 175 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 APBA1Q02410 837 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 ZACNQ401N2 412 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 KRT39Q6A163 491 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 FAM43BQ6ZT52 329 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-203ENST00000471658 TRAPPC11Q7Z392 1133 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 TAS1R2Q8TE23 839 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 SEMA4DQ92854 862 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 LBHD1Q9BQE6 289 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-203ENST00000471658 UBN1Q9NPG3 1134 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 SLC9A1P19634 815 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 SOX4Q06945 474 aaPredicted RBP20.75■□□□□ 0.91
PSPC1-203ENST00000471658 BIRC3Q13489 604 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 SYCP1Q15431 976 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 FKBP15Q5T1M5 1219 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 NPAS4Q8IUM7 802 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 C1orf127Q8N9H9 656 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 ANKRD36BP1Q96IX9 119 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 PPP1R10Q96QC0 940 aaKnown RBP20.75■□□□□ 0.91
PSPC1-203ENST00000471658 RPS6KC1Q96S38 1066 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 GOLGA2P5Q9HBQ8 144 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 CACNG4Q9UBN1 327 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 C2CD2Q9Y426 696 aa20.75■□□□□ 0.91
PSPC1-203ENST00000471658 TTC3P53804 2025 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 ZBBXA8MT70 800 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 TNNC2P02585 160 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 ACTN1P12814 892 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 PBX1P40424 430 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 NAB2Q15742 525 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 FAM117BQ6P1L5 589 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 DPP3Q9NY33 737 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 CXXC1Q9P0U4 656 aaPredicted RBP20.74■□□□□ 0.91
PSPC1-203ENST00000471658 SIX4Q9UIU6 781 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 DERAQ9Y315 318 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 NR2E3Q9Y5X4 410 aa20.74■□□□□ 0.91
PSPC1-203ENST00000471658 PHACTR2O75167 634 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 EPC2Q52LR7 807 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 GLB1LQ6UWU2 654 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 LMO3Q8TAP4 145 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 CXorf38Q8TB03 319 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 CACTINQ8WUQ7 758 aaKnown RBP20.73■□□□□ 0.91
PSPC1-203ENST00000471658 TOP1MTQ969P6 601 aa20.73■□□□□ 0.91
PSPC1-203ENST00000471658 CASD1Q96PB1 797 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms