RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TTC26A0AVF1 554 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 MFAP3LO75121 409 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 GYPCP04921 128 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 P4HA1P13674 534 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 UCHL3P15374 230 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 RAG1P15918 1043 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 ATF7P17544 494 aaPredicted RBP10.53□□□□□ -0.72
CCM2-204ENST00000470837 SLC9A1P19634 815 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 RFC2P35250 354 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 KLK7P49862 253 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 MFAP3P55082 362 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 ADKP55263 362 aaKnown RBP10.53□□□□□ -0.72
CCM2-204ENST00000470837 CCL23P55773 120 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 MCCD1P59942 119 aaPredicted RBP10.53□□□□□ -0.72
CCM2-204ENST00000470837 LRMPQ12912 555 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 MYO1EQ12965 1108 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 TBX2Q13207 712 aaPredicted RBP10.53□□□□□ -0.72
CCM2-204ENST00000470837 NCOA4Q13772 614 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 LRRC26Q2I0M4 334 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 SGSM1Q2NKQ1 1148 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 SLC10A6Q3KNW5 377 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 ZACNQ401N2 412 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 UBXN11Q5T124 520 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 KLHDC7AQ5VTJ3 777 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 TDRD10Q5VZ19 366 aaKnown RBP10.53□□□□□ -0.72
CCM2-204ENST00000470837 SLC24A5Q71RS6 500 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 RRAGAQ7L523 313 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 TRAPPC11Q7Z392 1133 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 TMEM192Q8IY95 271 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 PANX2Q96RD6 677 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 TRAIPQ9BWF2 469 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 NAA15Q9BXJ9 866 aaKnown RBP10.53□□□□□ -0.72
CCM2-204ENST00000470837 FBXL5Q9UKA1 691 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 LRFN2Q9ULH4 789 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 UBQLN1Q9UMX0 589 aaKnown RBP10.53□□□□□ -0.72
CCM2-204ENST00000470837 GIT1Q9Y2X7 761 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 HES2Q9Y543 173 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 EVPLQ92817 2033 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 ZNF623O75123 536 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 EOMESO95936 686 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 HLA-DRAP01903 254 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 C4BPAP04003 597 aaKnown RBP10.52□□□□□ -0.73
CCM2-204ENST00000470837 NFICP08651 508 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 ACTN1P12814 892 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 EN2P19622 333 aaPredicted RBP10.52□□□□□ -0.73
CCM2-204ENST00000470837 TBXAS1P24557 533 aaPredicted RBP10.52□□□□□ -0.73
CCM2-204ENST00000470837 CYP2C18P33260 490 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 STAT1P42224 750 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 YWHAEP62258 255 aaKnown RBP10.52□□□□□ -0.73
CCM2-204ENST00000470837 RBP5P82980 135 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 EPC2Q52LR7 807 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 C1orf220Q5T0J3 134 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 SFMBT2Q5VUG0 894 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 TRAF7Q6Q0C0 670 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 LRRC8AQ8IWT6 810 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 RPUSD2Q8IZ73 545 aaKnown RBP10.52□□□□□ -0.73
CCM2-204ENST00000470837 ABI1Q8IZP0 508 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 PPM1KQ8N3J5 372 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 TMEM199Q8N511 208 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 OR5B17Q8NGF7 314 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 URGCPQ8TCY9 931 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 TAS1R2Q8TE23 839 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 TAF4BQ92750 862 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 BAG1Q99933 345 aaPredicted RBP10.52□□□□□ -0.73
CCM2-204ENST00000470837 RSAD1Q9HA92 442 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 UBE2TQ9NPD8 197 aaPredicted RBP10.52□□□□□ -0.73
CCM2-204ENST00000470837 NLRC4Q9NPP4 1024 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 RGS18Q9NS28 235 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 ABHD10Q9NUJ1 306 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 DPP3Q9NY33 737 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 KLK14Q9P0G3 267 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 CNTN3Q9P232 1028 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 MYO6Q9UM54 1294 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 COQ4Q9Y3A0 265 aa10.52□□□□□ -0.73
CCM2-204ENST00000470837 HOXA2O43364 376 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 NBNO60934 754 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 OFD1O75665 1012 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 IPO7O95373 1038 aaKnown RBP10.51□□□□□ -0.73
CCM2-204ENST00000470837 TIMP1P01033 207 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 THP07101 528 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 SKILP12757 684 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 KCNE1P15382 129 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 ATICP31939 592 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 FXR1P51114 621 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCM2-204ENST00000470837 IKBKEQ14164 716 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 DSC3Q14574 896 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 ZNF699Q32M78 642 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 PLEKHG4Q58EX7 1191 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 GLB1LQ6UWU2 654 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 CYP26C1Q6V0L0 522 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 C15orf39Q6ZRI6 1047 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 DEFB128Q7Z7B8 93 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 MRPL10Q7Z7H8 261 aaKnown RBP10.51□□□□□ -0.73
CCM2-204ENST00000470837 VPS36Q86VN1 386 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 ECHDC2Q86YB7 292 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 EFCAB13Q8IY85 973 aa10.51□□□□□ -0.73
CCM2-204ENST00000470837 SMG8Q8ND04 991 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms