RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 LAMB1P07942 1786 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 GLRX3O76003 335 aaKnown RBP7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 CCL5P13501 91 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 EEF2P13639 858 aaKnown RBP7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 ATF2P15336 505 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 VCAM1P19320 739 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 IGFBP6P24592 240 aaPredicted RBP7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 RBM10P98175 930 aaKnown RBP7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 TARBP2Q15633 366 aaKnown RBP7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 CCL14Q16627 93 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 WDR78Q5VTH9 848 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 CATSPERGQ6ZRH7 1159 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 RASGRP2Q7LDG7 609 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 KRTAP1-3Q8IUG1 177 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 SCUBE1Q8IWY4 988 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 APPBP2Q92624 585 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 RILPL2Q969X0 211 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 JAM3Q9BX67 310 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 ATP8A2Q9NTI2 1148 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 GJD2Q9UKL4 321 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 TRAF6Q9Y4K3 522 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 CEP290O15078 2479 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 NAV1Q8NEY1 1877 aa7.94□□□□□ -1.14
PTP4A1-202ENST00000470661 A0A0D9SFI3 127 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 C19orf81C9J6K1 198 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 H7BY64 318 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 RFXAPO00287 272 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 NMT2O60551 498 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 PFKLP17858 780 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 HOXA7P31268 230 aaPredicted RBP7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 TDO2P48775 406 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 NUCB1Q02818 461 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 SLC9A5Q14940 896 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 ZSCAN25Q6NSZ9 544 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 RSPO2Q6UXX9 243 aaPredicted RBP7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 C16orf86Q6ZW13 317 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 ZNF589Q86UQ0 364 aaPredicted RBP7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 CHD1LQ86WJ1 897 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 SMC5Q8IY18 1101 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 IFNL3Q8IZI9 196 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 GPRC5AQ8NFJ5 357 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 ZSCAN18Q8TBC5 510 aaPredicted RBP7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 SEC14L1Q92503 715 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 UBXN4Q92575 508 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 IPO9Q96P70 1041 aaKnown RBP7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 RWDD1Q9H446 243 aaPredicted RBP7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 STAP2Q9UGK3 403 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 SLC45A1Q9Y2W3 748 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 TTC41PQ6P2S7 1318 aa7.93□□□□□ -1.14
PTP4A1-202ENST00000470661 DDX60LQ5H9U9 1706 aaKnown RBP7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 MGAMO43451 1857 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 MYH7P12883 1935 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 ERC2O15083 957 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 HOXD10P28358 340 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 SLC6A11P48066 632 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 SNAP25P60880 206 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 GPR85P60893 370 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 HAND2P61296 217 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 SUMO1P63165 101 aaKnown RBP7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 ICA1Q05084 483 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 PLS1Q14651 629 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 ARHGEF6Q15052 776 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 ZNF385BQ569K4 471 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 FAM83BQ5T0W9 1011 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 CNKSR3Q6P9H4 555 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 LBX2Q6XYB7 198 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 LCNL1Q6ZST4 164 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 MILR1Q7Z6M3 343 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 FAM129CQ86XR2 697 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 GCC1Q96CN9 775 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 DEFB118Q96PH6 123 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 KIAA1683Q9H0B3 1180 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 RNF38Q9H0F5 515 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 ZSWIM4Q9H7M6 989 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 FLRT1Q9NZU1 646 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 CLIP2Q9UDT6 1046 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 FAN1Q9Y2M0 1017 aa7.92□□□□□ -1.14
PTP4A1-202ENST00000470661 C6orf222P0C671 652 aaPredicted RBP7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 NCAM1P13591 858 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 GCLCP48506 637 aaPredicted RBP7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 PABPC4Q13310 644 aaKnown RBP eCLIP7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 FZD5Q13467 585 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 FAM110CQ1W6H9 321 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 CCDC144BQ3MJ40 725 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 TMEM179Q6ZVK1 233 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 GPR142Q7Z601 462 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 CERS3Q8IU89 383 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 LILRB2Q8N423 598 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 TRIB2Q92519 343 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 COA7Q96BR5 231 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 DHRS4Q9BTZ2 278 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 IL25Q9H293 177 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 EPB41L1Q9H4G0 881 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 MORF4L1Q9UBU8 362 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 SWAP70Q9UH65 585 aa7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 MRPS23Q9Y3D9 190 aaKnown RBP7.91□□□□□ -1.14
PTP4A1-202ENST00000470661 LOC285556D6RIA3 1793 aa7.9□□□□□ -1.14
PTP4A1-202ENST00000470661 IGSF3O75054 1194 aa7.9□□□□□ -1.14
PTP4A1-202ENST00000470661 DGKIO75912 1065 aa7.9□□□□□ -1.14
PTP4A1-202ENST00000470661 FLOT1O75955 427 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms