RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 TRIM74Q86UV6 250 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 TRIM73Q86UV7 250 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 NLRP4Q96MN2 994 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 INO80BQ9C086 356 aaPredicted RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 CYP4F11Q9HBI6 524 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 COG5Q9UP83 839 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 FIS1Q9Y3D6 152 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 LRP6O75581 1613 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 PODXLO00592 558 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 MEIS2O14770 477 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 ECHS1P30084 290 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 TMEM119Q4V9L6 283 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 CCDC62Q6P9F0 684 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 ARMC9Q7Z3E5 817 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 YTHDF3Q7Z739 585 aaKnown RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 SLC13A5Q86YT5 568 aaPredicted RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 PAF1Q8N7H5 531 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 APOL6Q9BWW8 343 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 KCNH7Q9NS40 1196 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 NOP53Q9NZM5 478 aaKnown RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 EXOC7Q9UPT5 735 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 ASTN1O14525 1302 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 hCG_2014768A0A024R1R8 64 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 TGFB1I1O43294 461 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 ATP6V1G2O95670 118 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 SPATA31C1P0DKV0 1188 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 YWHABP31946 246 aaKnown RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 ELF3P78545 371 aaPredicted RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 ASTE1Q2TB18 679 aaPredicted RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 CFAP157Q5JU67 520 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 ZNF572Q7Z3I7 529 aaPredicted RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 NOP9Q86U38 636 aaKnown RBP11.37□□□□□ -0.59
CHD3-208ENST00000470531 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 RHPN2Q8IUC4 686 aa11.37□□□□□ -0.59
CHD3-208ENST00000470531 PJA2O43164 708 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 TMEM253P0C7T8 217 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 EPHB1P54762 984 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 SPP2Q13103 211 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 MTMR2Q13614 643 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 PRELID2Q8N945 189 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 NETO2Q8NC67 525 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 PPFIBP2Q8ND30 876 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 ACTRT1Q8TDG2 376 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 ZSWIM1Q9BR11 485 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 TMEM121Q9BTD3 319 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 SMYD2Q9NRG4 433 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 GOLGA4Q13439 2230 aaKnown RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 ZBED4O75132 1171 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 ABCD1P33897 745 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 RASSF2P50749 326 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 ALDH5A1P51649 535 aaPredicted RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 ZRSR2Q15696 482 aaKnown RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 RASIP1Q5U651 963 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 DNAJC24Q6P3W2 148 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 ZNF720Q7Z2F6 126 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 LMNTD2Q8IXW0 634 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 ANKRD35Q8N283 1001 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 PPM1NQ8N819 430 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 NGRNQ9NPE2 291 aaKnown RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 PEX10O60683 326 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 TROVE2P10155 538 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD3-208ENST00000470531 CNGA1P29973 690 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 HNRNPH3P31942 346 aaKnown RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 QARSP47897 775 aaKnown RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 CCNHP51946 323 aaPredicted RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 AP3B2Q13367 1082 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 AGAP11Q8TF27 550 aa11.36□□□□□ -0.59
CHD3-208ENST00000470531 PPARGC1AQ9UBK2 798 aaKnown RBP11.36□□□□□ -0.59
CHD3-208ENST00000470531 H0YGN5 161 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 K7ERI5 159 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 OPHN1O60890 802 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 TOM1L1O75674 476 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 TNFRSF8P28908 595 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 GNA15P30679 374 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 CA8P35219 290 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 KRT39Q6A163 491 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 FBXL13Q8NEE6 735 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 MCEEQ96PE7 176 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 FAM129AQ9BZQ8 928 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 TRABDQ9H4I3 376 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 CHMP2BQ9UQN3 213 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 NFS1Q9Y697 457 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 INHBAP08476 426 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 C6orf163Q5TEZ5 329 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 EMC1Q8N766 993 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 FAXDC2Q96IV6 333 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 TXNDC16Q9P2K2 825 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 KLHL33A6NCF5 533 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 O00370 1275 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 RTN2O75298 545 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 MT-ND3P03897 115 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 DRD4P21917 467 aa11.35□□□□□ -0.59
CHD3-208ENST00000470531 TTC27Q6P3X3 843 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms