RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 BSNDQ8WZ55 320 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 RIPOR3Q96MK2 946 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 NECTIN4Q96NY8 510 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 KLHL5Q96PQ7 755 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 TMEM175Q9BSA9 504 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 EMILIN2Q9BXX0 1053 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 SMOC2Q9H3U7 446 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 PARP2Q9UGN5 583 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 FAM237AA0A1B0GTK4 181 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 SOD2P04179 222 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 CEP135Q66GS9 1140 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 KIAA1841Q6NSI8 718 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 PADI6Q6TGC4 694 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 KREMEN2Q8NCW0 462 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 KIFC3Q9BVG8 833 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 DZANK1Q9NVP4 752 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
FAM228B-203ENST00000469867 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 TEX28O15482 410 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 LILRB3O75022 631 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 PDGFBP01127 241 aaPredicted RBP12.73□□□□□ -0.37
FAM228B-203ENST00000469867 MTHFRP42898 656 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 ZNF75DP51815 510 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 NHLH1Q02575 133 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 ECM1Q16610 540 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 PPFIBP1Q86W92 1011 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 SUGP1Q8IWZ8 645 aaKnown RBP12.73□□□□□ -0.37
FAM228B-203ENST00000469867 ERMNQ8TAM6 284 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 ASIC4Q96FT7 647 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 RPS6KC1Q96S38 1066 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 PAAF1Q9BRP4 392 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
FAM228B-203ENST00000469867 SPATA31D3P0C874 917 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 GABPB1Q06547 395 aaPredicted RBP12.73□□□□□ -0.37
FAM228B-203ENST00000469867 SPATA31D4Q6ZUB0 917 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 BMP8AQ7Z5Y6 402 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 ALYREFQ86V81 257 aaKnown RBP12.73□□□□□ -0.37
FAM228B-203ENST00000469867 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 HASPINQ8TF76 798 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 DHX58Q96C10 678 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 GPR62Q9BZJ7 368 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 BHMT2Q9H2M3 363 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 GIT1Q9Y2X7 761 aa12.73□□□□□ -0.37
FAM228B-203ENST00000469867 GOLGA6L6A8MZA4 724 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 INPPL1O15357 1258 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 BMP6P22004 513 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 CCT6AP40227 531 aaKnown RBP12.72□□□□□ -0.37
FAM228B-203ENST00000469867 ZBTB8OSQ8IWT0 167 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 FBXL6Q8N531 539 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 CXCL16Q9H2A7 254 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 SFXN1Q9H9B4 322 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 MAN1C1Q9NR34 630 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
FAM228B-203ENST00000469867 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 PCDHA5Q9Y5H7 936 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 SPTBN4Q9H254 2564 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 ACTN4O43707 911 aaKnown RBP12.72□□□□□ -0.37
FAM228B-203ENST00000469867 EDN1P05305 212 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 ADH1AP07327 375 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 CYP11B2P19099 503 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 GLUD2P49448 558 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 MTMR3Q13615 1198 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 IQCB1Q15051 598 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 MAPK6Q16659 721 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 CDCA2Q69YH5 1023 aaPredicted RBP12.72□□□□□ -0.37
FAM228B-203ENST00000469867 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 PALB2Q86YC2 1186 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 KRT222Q8N1A0 295 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 TDRD5Q8NAT2 981 aaKnown RBP12.72□□□□□ -0.37
FAM228B-203ENST00000469867 PLIN2Q99541 437 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 FZD8Q9H461 694 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 LRWD1Q9UFC0 647 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 SORCS3Q9UPU3 1222 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 KIAA1024Q9UPX6 916 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
FAM228B-203ENST00000469867 CASTOR2A6NHX0 329 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 RFPL2O75678 378 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
FAM228B-203ENST00000469867 AFMP43652 599 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 VCPP55072 806 aaKnown RBP12.71□□□□□ -0.37
FAM228B-203ENST00000469867 PRPF4BQ13523 1007 aaKnown RBP12.71□□□□□ -0.37
FAM228B-203ENST00000469867 KIAA0319Q5VV43 1072 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 CCDC149Q6ZUS6 474 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 GPR149Q86SP6 731 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 IPO4Q8TEX9 1081 aaKnown RBP12.71□□□□□ -0.37
FAM228B-203ENST00000469867 LRRC15Q8TF66 581 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 SNTG2Q9NY99 539 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 ADAM28Q9UKQ2 775 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 TRAPPC10P48553 1259 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 HNRNPH2P55795 449 aaKnown RBP12.71□□□□□ -0.37
FAM228B-203ENST00000469867 GRIK3Q13003 919 aa12.71□□□□□ -0.37
FAM228B-203ENST00000469867 STX1AQ16623 288 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms