RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 TRABD2AQ86V40 505 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 CCDC105Q8IYK2 499 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 SYT2Q8N9I0 419 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 SLC30A5Q8TAD4 765 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 U2AF1L4Q8WU68 220 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 SNRNP27Q8WVK2 155 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 SNF8Q96H20 258 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 FOXP3Q9BZS1 431 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 RBM38Q9H0Z9 239 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 ARL8BQ9NVJ2 186 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 NLRP2Q9NX02 1062 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 ARHGEF38Q9NXL2 777 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 FADS3Q9Y5Q0 445 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 A0A1B0GUL6 1792 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 MATN2O00339 956 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 BUD23O43709 281 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 ZNF862O60290 1169 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 SORBS3O60504 671 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 CSDE1O75534 798 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 CSF1RP07333 972 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 ESRRAP11474 423 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 PAX3P23760 479 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 COPB2P35606 906 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 VPS41P49754 854 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 ACTR3P61158 418 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 TBL3Q12788 808 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 BCL2A1Q16548 175 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 TMEM266Q2M3C6 531 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 ANKRD20A4Q4UJ75 823 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 SYCP2LQ5T4T6 812 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 KLHDC10Q6PID8 442 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 ADAT2Q7Z6V5 191 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 RASSF3Q86WH2 238 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 LRRC6Q86X45 466 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 SFR1Q86XK3 245 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 DEPTORQ8TB45 409 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 PLEKHO2Q8TD55 490 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 DDI1Q8WTU0 396 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 MAML1Q92585 1016 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 MRPS26Q9BYN8 205 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 EBF3Q9H4W6 596 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 NRDE2Q9H7Z3 1164 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 PFDN4Q9NQP4 134 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 BLOC1S4Q9NUP1 217 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 TAS2R1Q9NYW7 299 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 NINJ2Q9NZG7 142 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 PCDHA6Q9UN73 950 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 EFR3BQ9Y2G0 817 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 MTO1Q9Y2Z2 717 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 PCDHA8Q9Y5H6 950 aa9.58□□□□□ -0.88
SMARCE1-207ENST00000469334 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 SH3PXD2BA1X283 911 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 P4HA2O15460 535 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 FGRP09769 529 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 SMIM18P0DKX4 95 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 GRB10Q13322 594 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 LPIN1Q14693 890 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 INF2Q27J81 1249 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 MAP7D1Q3KQU3 841 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 DNAL1Q4LDG9 190 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 EAPPQ56P03 285 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 KLHL35Q6PF15 583 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 KYAT3Q6YP21 454 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 RBM44Q6ZP01 1051 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 TRIM67Q6ZTA4 783 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 KRT25Q7Z3Z0 450 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 FRMD5Q7Z6J6 570 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 TMPRSS6Q8IU80 811 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 CYP4X1Q8N118 509 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 LCORLQ8N3X6 602 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 BBOF1Q8ND07 529 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 TTLL11Q8NHH1 800 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 ALG3Q92685 438 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 RAD54LQ92698 747 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 SKA1Q96BD8 255 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 CDK5RAP3Q96JB5 506 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 ZSWIM1Q9BR11 485 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 LRRC19Q9H756 370 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 SLCO1B3Q9NPD5 702 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 CROTQ9UKG9 612 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 HDAC9Q9UKV0 1011 aa9.57□□□□□ -0.88
SMARCE1-207ENST00000469334 ANKRD63C9JTQ0 380 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 PRKAB2O43741 272 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 AMPD1P23109 780 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 HDAC4P56524 1084 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 CDK16Q00536 496 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 ZNF211Q13398 564 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 CTTNQ14247 550 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 RASA2Q15283 850 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 LRRC8BQ6P9F7 803 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 DHRS4L2Q6PKH6 230 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 VGLL2Q8N8G2 317 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 DNAJC1Q96KC8 554 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 FAM161BQ96MY7 647 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 TRIM55Q9BYV6 548 aa9.56□□□□□ -0.88
SMARCE1-207ENST00000469334 KLHL4Q9C0H6 718 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms