RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CHST15Q7LFX5 561 aaPredicted RBP6.5□□□□□ -1.37
LSM5-209ENST00000468872 TAS1R1Q7RTX1 841 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 DENND1CQ8IV53 801 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 MB21D1Q8N884 522 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 ATXN2LQ8WWM7 1075 aaKnown RBP6.5□□□□□ -1.37
LSM5-209ENST00000468872 SARGQ9BW04 601 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 IKZF4Q9H2S9 585 aa6.5□□□□□ -1.37
LSM5-209ENST00000468872 FAM171A2A8MVW0 826 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 H3BML4 177 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 IPO13O94829 963 aaKnown RBP6.49□□□□□ -1.37
LSM5-209ENST00000468872 ALDH2P05091 517 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 PURAQ00577 322 aaKnown RBP6.49□□□□□ -1.37
LSM5-209ENST00000468872 UBE4AQ14139 1066 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 MST1LQ2TV78 715 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 C19orf54Q5BKX5 351 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 CAMKK1Q8N5S9 505 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 MDGA1Q8NFP4 955 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.49□□□□□ -1.372e-7■□□□□ 9.7
LSM5-209ENST00000468872 ST8SIA2Q92186 375 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 PGBD4Q96DM1 585 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 MNTQ99583 582 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 C7orf25Q9BPX7 421 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 SIK3Q9Y2K2 1263 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 PCDHB1Q9Y5F3 818 aa6.49□□□□□ -1.37
LSM5-209ENST00000468872 CFAP20Q9Y6A4 193 aaKnown RBP6.49□□□□□ -1.37
LSM5-209ENST00000468872 OVOL3O00110 214 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 NRP1O14786 923 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 PLIN1O60240 522 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 PHF2O75151 1096 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 PEX14O75381 377 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 TUSC2O75896 110 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 ALDH1A2O94788 518 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 UBXN7O94888 489 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 GNAT2P19087 354 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 INHBCP55103 352 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 RHBDL3P58872 404 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 LLGL1Q15334 1064 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 FAM214AQ32MH5 1076 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 FAM180AQ6UWF9 173 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 ZNF627Q7L945 461 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 LDLRAD3Q86YD5 345 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 LILRA3Q8N6C8 439 aaPredicted RBP6.48□□□□□ -1.37
LSM5-209ENST00000468872 NSUN6Q8TEA1 469 aaKnown RBP6.48□□□□□ -1.37
LSM5-209ENST00000468872 SLC39A13Q96H72 371 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 LRFN3Q9BTN0 628 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 ENKD1Q9H0I2 346 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 DDX21Q9NR30 783 aaKnown RBP eCLIP6.48□□□□□ -1.37
LSM5-209ENST00000468872 MAN1C1Q9NR34 630 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 GPRC5BQ9NZH0 403 aa6.48□□□□□ -1.37
LSM5-209ENST00000468872 GOLGA6L6A8MZA4 724 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 TPP1O14773 563 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 B3GALT2O43825 422 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 FAM20BO75063 409 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 ECHS1P30084 290 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 MAP2K6P52564 334 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 RABL3Q5HYI8 236 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 SYCP2LQ5T4T6 812 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 NAIF1Q69YI7 327 aaPredicted RBP6.47□□□□□ -1.37
LSM5-209ENST00000468872 PPP4R4Q6NUP7 873 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 APBB1IPQ7Z5R6 666 aaPredicted RBP6.47□□□□□ -1.37
LSM5-209ENST00000468872 RHOT1Q8IXI2 618 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 PJA1Q8NG27 643 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 CGRRF1Q99675 332 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.47□□□□□ -1.37
LSM5-209ENST00000468872 TRPS1Q9UHF7 1281 aa6.47□□□□□ -1.37
LSM5-209ENST00000468872 APAF1O14727 1248 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 HOXA3O43365 443 aaPredicted RBP6.46□□□□□ -1.38
LSM5-209ENST00000468872 SGTAO43765 313 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 RPS6KA4O75676 772 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 ENDOD1O94919 500 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 ZBED1O96006 694 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 RHCEP18577 417 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 HTR1BP28222 390 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 SREBF1P36956 1147 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 WNT3AP56704 352 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 RHDQ02161 417 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 TARDBPQ13148 414 aaKnown RBP eCLIP6.46□□□□□ -1.38
LSM5-209ENST00000468872 COBLL1Q53SF7 1204 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 DCAF17Q5H9S7 520 aaPredicted RBP6.46□□□□□ -1.38
LSM5-209ENST00000468872 GJC2Q5T442 439 aaPredicted RBP6.46□□□□□ -1.38
LSM5-209ENST00000468872 SRGAP1Q7Z6B7 1085 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 TTC7BQ86TV6 843 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 FAM43AQ8N2R8 423 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 FAM156AQ8NDB6 213 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 ZNF480Q8WV37 535 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 TTC17Q96AE7 1141 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 RGMAQ96B86 450 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 DMRTA2Q96SC8 542 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 PDCD2LQ9BRP1 358 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 B3GNT5Q9BYG0 378 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 TMEM60Q9H2L4 133 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 FAM204AQ9H8W3 233 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 FAM50BQ9Y247 325 aa6.46□□□□□ -1.38
LSM5-209ENST00000468872 A0A087X1B8 175 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 LRRC14BA6NHZ5 514 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 GRXCR1A8MXD5 290 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 FAM227AF5H4B4 570 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 ADCY6O43306 1168 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 FTLP02792 175 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms