RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CNPP09543 421 aaKnown RBP15.8■□□□□ 0.12
COL27A1-203ENST00000468565 NOLC1Q14978 699 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL27A1-203ENST00000468565 ALKAL1Q6UXT8 129 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 CCDC73Q6ZRK6 1079 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 TAS1R1Q7RTX1 841 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 ZBTB33Q86T24 672 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 ACAP3Q96P50 834 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 RXFP1Q9HBX9 757 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 SF3B1O75533 1304 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL27A1-203ENST00000468565 K7ENM7 598 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 SPTLC2O15270 562 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 TADA2AO75478 443 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 YEATS4O95619 227 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 PIGRP01833 764 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 CLCN4P51793 760 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 ITIH3Q06033 890 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 USP41Q3LFD5 358 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 SNX27Q96L92 541 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 UROC1Q96N76 676 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 FIZ1Q96SL8 496 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 PAAF1Q9BRP4 392 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 GPR62Q9BZJ7 368 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 ANK1P16157 1881 aa15.8■□□□□ 0.12
COL27A1-203ENST00000468565 TMEM189-UBE2V1I3L0A0 370 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 C1RP00736 705 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 EPCAMP16422 314 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 KLRC2P26717 231 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 MCL1Q07820 350 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 GLRA4Q5JXX5 417 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 KIAA1841Q6NSI8 718 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 SV2BQ7L1I2 683 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 ZBTB45Q96K62 511 aaPredicted RBP15.79■□□□□ 0.12
COL27A1-203ENST00000468565 PHF7Q9BWX1 381 aaPredicted RBP15.79■□□□□ 0.12
COL27A1-203ENST00000468565 ADAM7Q9H2U9 754 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 ST6GALNAC4Q9H4F1 302 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.79■□□□□ 0.12
COL27A1-203ENST00000468565 SLC38A7Q9NVC3 462 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 ANKFY1Q9P2R3 1169 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 CACNG4Q9UBN1 327 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 TBX20Q9UMR3 447 aa15.79■□□□□ 0.12
COL27A1-203ENST00000468565 SMIM28A0A1B0GU29 152 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 C2CD2LO14523 706 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 CLDN3O15551 220 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 KIF4AO95239 1232 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 ADH1AP07327 375 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 KCNE1P15382 129 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 OSTNP61366 133 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 GTF2BQ00403 316 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 CREMQ03060 361 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 ELAVL2Q12926 359 aaKnown RBP15.78■□□□□ 0.12
COL27A1-203ENST00000468565 CBX2Q14781 532 aaPredicted RBP15.78■□□□□ 0.12
COL27A1-203ENST00000468565 CAMK4Q16566 473 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 CES5AQ6NT32 575 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 RBM43Q6ZSC3 357 aaKnown RBP15.78■□□□□ 0.12
COL27A1-203ENST00000468565 RABGGTAQ92696 567 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 BICD1Q96G01 975 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 ZHX3Q9H4I2 956 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 CNTN3Q9P232 1028 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 USP25Q9UHP3 1055 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 ZKSCAN5Q9Y2L8 839 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 LOC730098B7Z3J9 87 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 PI4K2BG5E9Z4 385 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 HARSP12081 509 aaKnown RBP15.78■□□□□ 0.12
COL27A1-203ENST00000468565 STAT6P42226 847 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 LIG4P49917 911 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 TYRO3Q06418 890 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 DCLRE1AQ6PJP8 1040 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 FBXL18Q96ME1 805 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 NECTIN4Q96NY8 510 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 C1QTNF1Q9BXJ1 281 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 FNIP2Q9P278 1114 aa15.78■□□□□ 0.12
COL27A1-203ENST00000468565 HNRNPDLO14979 420 aaKnown RBP15.77■□□□□ 0.12
COL27A1-203ENST00000468565 TEX28O15482 410 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 KYAT1Q16773 422 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 MAP4K3Q8IVH8 894 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 FAM200AQ8TCP9 573 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 DDX12PQ92771 950 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 KHSRPQ92945 711 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL27A1-203ENST00000468565 RNF25Q96BH1 459 aaPredicted RBP15.77■□□□□ 0.12
COL27A1-203ENST00000468565 EPHX3Q9H6B9 360 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 SFXN1Q9H9B4 322 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 SEL1LQ9UBV2 794 aa15.77■□□□□ 0.12
COL27A1-203ENST00000468565 A0A087X0B3 334 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 MYMKA6NI61 221 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 CUTAO60888 179 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 ADCY5O95622 1261 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 GAP43P17677 238 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 NMT1P30419 496 aaKnown RBP15.76■□□□□ 0.11
COL27A1-203ENST00000468565 MATR3P43243 847 aaKnown RBP eCLIP15.76■□□□□ 0.11
COL27A1-203ENST00000468565 UPP1Q16831 310 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 SASS6Q6UVJ0 657 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 DYMQ7RTS9 669 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 HASPINQ8TF76 798 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 HVCN1Q96D96 273 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 DNAJC19Q96DA6 116 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 DDX27Q96GQ7 796 aaKnown RBP15.76■□□□□ 0.11
COL27A1-203ENST00000468565 B3GALT6Q96L58 329 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 ZMAT2Q96NC0 199 aaKnown RBP15.76■□□□□ 0.11
COL27A1-203ENST00000468565 APOL5Q9BWW9 433 aa15.76■□□□□ 0.11
COL27A1-203ENST00000468565 HAPLN2Q9GZV7 340 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms