RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 UIMC1Q96RL1 719 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 DNAJC7Q99615 494 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 MCMBPQ9BTE3 642 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PHF20Q9BVI0 1012 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 SPATA9Q9BWV2 254 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 NKX2-4Q9H2Z4 354 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 ZSCAN16Q9H4T2 348 aaPredicted RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PIF1Q9H611 641 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 SLC38A10Q9HBR0 1119 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 SH3GLB2Q9NR46 395 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 AP5S1Q9NUS5 200 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PFDN2Q9UHV9 154 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PCDHA6Q9UN73 950 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 AGTPBP1Q9UPW5 1226 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 CNPY2Q9Y2B0 182 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 MRPL11Q9Y3B7 192 aaKnown RBP4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 PCDHA8Q9Y5H6 950 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 BACE2Q9Y5Z0 518 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 SRCAPQ6ZRS2 3230 aa4.63□□□□□ -1.67
TMEM39A-204ENST00000468545 DOCK1Q14185 1865 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 GREB1LQ9C091 1923 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 C2orf71A6NGG8 1288 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 MANSC4A6NHS7 340 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 GCOM1H8Y6P7 765 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 hCG_1984214I3L0E3 225 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 FGF10O15520 208 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 FIBPO43427 364 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ADCY3O60266 1144 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 MARCH6O60337 910 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 CAPNS1P04632 268 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ICAM1P05362 532 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ZGLP1P0C6A0 271 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 POLR2MP0CAP2 368 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ZBTB48P10074 688 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 HOXA7P31268 230 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 HERVK_113P62684 666 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 UBXN2AP68543 259 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 TRAF1Q13077 416 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 MOGSQ13724 837 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 STK38Q15208 465 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 INF2Q27J81 1249 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 MUM1L1Q5H9M0 696 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 EARS2Q5JPH6 523 aaKnown RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 EEF1DP3Q658K8 133 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ANKRD23Q86SG2 305 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 NOSTRINQ8IVI9 506 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 KSR1Q8IVT5 923 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 FAM43AQ8N2R8 423 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ANKRD13CQ8N6S4 541 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ZNF713Q8N859 430 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 NAT16Q8N8M0 369 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ANKS4BQ8N8V4 417 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 PDZD8Q8NEN9 1154 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 BICD2Q8TD16 824 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 LINC01599Q8WXQ3 324 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 MAP6Q96JE9 813 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 GBP4Q96PP9 640 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 PTPN18Q99952 460 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 AARSD1Q9BTE6 412 aaKnown RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 G6PC3Q9BUM1 346 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 FTOQ9C0B1 505 aaKnown RBP eCLIP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ZMYND12Q9H0C1 365 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ADAMTS10Q9H324 1103 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 FOXP1Q9H334 677 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 RC3H2Q9HBD1 1191 aaKnown RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 RIC8AQ9NPQ8 531 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 CYP26B1Q9NR63 512 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ARHGEF4Q9NR80 690 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 RNF146Q9NTX7 359 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ERVK13-1Q9NX77 482 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 BTBD7Q9P203 1132 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 RBPJLQ9UBG7 517 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 CPA4Q9UI42 421 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 NOL7Q9UMY1 257 aaKnown RBP4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 RIPK3Q9Y572 518 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ATP6V1DQ9Y5K8 247 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 CLIC4Q9Y696 253 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ZNF536O15090 1300 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 ABCB11O95342 1321 aa4.62□□□□□ -1.67
TMEM39A-204ENST00000468545 PAPPA2Q9BXP8 1791 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TRAV20A0A0B4J274 112 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 GOLGA6L4A6NEF3 574 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 GOLGA6L22H0YM25 854 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 NFIBO00712 420 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CCNT1O60563 726 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CNMDO75829 334 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 SCG5P05408 212 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 SNRPB2P08579 225 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 FGFR1P11362 822 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 MYCLP12524 364 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 U2AF2P26368 475 aaKnown RBP eCLIP4.61□□□□□ -1.675e-17■■■■■ 40.1
TMEM39A-204ENST00000468545 MARCKSP29966 332 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 HOXC12P31275 282 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 MCM7P33993 719 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 GDNFP39905 211 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 KIR2DL1P43626 348 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 KIR2DL2P43627 348 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 SEPHS1P49903 392 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 GFRA1P56159 465 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms