RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GLYCTKQ8IVS8 523 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 KIAA0319LQ8IZA0 1049 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 ZSWIM2Q8NEG5 633 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 LNX1Q8TBB1 728 aaPredicted RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 ATRIPQ8WXE1 791 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 VCPIP1Q96JH7 1222 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 ZBTB45Q96K62 511 aaPredicted RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 SELENOOQ9BVL4 669 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 CDT1Q9H211 546 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 VRTNQ9H8Y1 702 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 UVRAGQ9P2Y5 699 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 AJAP1Q9UKB5 411 aaPredicted RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 C2CD2Q9Y426 696 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 A0A087WZ62 844 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 A0A1B0GUA9 196 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 TARSL2A2RTX5 802 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 STAU1O95793 577 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 ABL1P00519 1130 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 ASS1P00966 412 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 GNRH1P01148 92 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 ATP1A1P05023 1023 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 SMIM10L2AP0DMW4 78 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 SMIM10L2BP0DMW5 78 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 CYP2B6P20813 491 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 USP8P40818 1118 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 GALCP54803 685 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 GJA9P57773 515 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 NOP14P78316 857 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 IGBP1P78318 339 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 ARHGEF6Q15052 776 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 BRD3Q15059 726 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 RPS6KA1Q15418 735 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 PPP2R5EQ16537 467 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 AMHR2Q16671 573 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 MARCH8Q5T0T0 291 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 MEI1Q5TIA1 1274 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 CCDC181Q5TID7 509 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 RPUSD2Q8IZ73 545 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 CAGE1Q8TC20 777 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 TRAPPC12Q8WVT3 735 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 SCLT1Q96NL6 688 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 OSBPL9Q96SU4 736 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 FDXACB1Q9BRP7 624 aaPredicted RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 CCDC94Q9BW85 323 aaPredicted RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 DNAI2Q9GZS0 605 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 NIF3L1Q9GZT8 377 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 HAPLN2Q9GZV7 340 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 NOCTQ9UK39 431 aaKnown RBP10.94□□□□□ -0.66
MSH5-213ENST00000468136 GTF3C4Q9UKN8 822 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 CAPN6Q9Y6Q1 641 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 DUSP10Q9Y6W6 482 aa10.94□□□□□ -0.66
MSH5-213ENST00000468136 MIF4GDA9UHW6 222 aaKnown RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 CYP26A1O43174 497 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 XPOTO43592 962 aaKnown RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 ERLIN1O75477 346 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 PALMO75781 387 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 TOMM70O94826 608 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 LSM8O95777 96 aaKnown RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 HOXC8P31273 242 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 GRM5P41594 1212 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 ADAM17P78536 824 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 FSCN1Q16658 493 aaKnown RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 GLE1Q53GS7 698 aaKnown RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 GJC2Q5T442 439 aaPredicted RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 C11orf63Q6NUN7 778 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 NOTUMQ6P988 496 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 RSPH3Q86UC2 560 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 MSANTD4Q8NCY6 345 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 ACAP3Q96P50 834 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 RPS6KC1Q96S38 1066 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 NAP1L3Q99457 506 aaPredicted RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 MTG1Q9BT17 334 aaPredicted RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 TLR10Q9BXR5 811 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 ZNF518BQ9C0D4 1074 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 UPF3AQ9H1J1 476 aaKnown RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 CYP3A43Q9HB55 503 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 AVENQ9NQS1 362 aaPredicted RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 TOPORSQ9NS56 1045 aaPredicted RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 SEPT11Q9NVA2 429 aaKnown RBP10.93□□□□□ -0.66
MSH5-213ENST00000468136 AMFRQ9UKV5 643 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 ITGA11Q9UKX5 1188 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 ZSWIM8A7E2V4 1837 aa10.93□□□□□ -0.66
MSH5-213ENST00000468136 KAT6AQ92794 2004 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 C17orf102A2RUQ5 167 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 CCDC151A5D8V7 595 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 TSPAN1O60635 241 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 VNN1O95497 513 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 FTLP02792 175 aaPredicted RBP10.92□□□□□ -0.66
MSH5-213ENST00000468136 STAG3L1P0CL83 205 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 CYP2C9P11712 490 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 HARSP12081 509 aaKnown RBP10.92□□□□□ -0.66
MSH5-213ENST00000468136 KRT5P13647 590 aa10.92□□□□□ -0.66
MSH5-213ENST00000468136 DARSP14868 501 aaKnown RBP10.92□□□□□ -0.66
MSH5-213ENST00000468136 H2AFXP16104 143 aaPredicted RBP10.92□□□□□ -0.66
MSH5-213ENST00000468136 ARF4P18085 180 aaPredicted RBP10.92□□□□□ -0.66
MSH5-213ENST00000468136 PSMC4P43686 418 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms