RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 PTCH2Q9Y6C5 1203 aa22.2■■□□□ 1.14
TMEM53-207ENST00000468117 MEFVO15553 781 aaPredicted RBP22.19■■□□□ 1.14
TMEM53-207ENST00000468117 PHACTR2O75167 634 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 MFAP3P55082 362 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 GNG11P61952 73 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 TFAMQ00059 246 aaKnown RBP22.19■■□□□ 1.14
TMEM53-207ENST00000468117 SLC18A3Q16572 532 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 SPOPLQ6IQ16 392 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 WNT8BQ93098 351 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 HMX1Q9NP08 348 aaPredicted RBP22.19■■□□□ 1.14
TMEM53-207ENST00000468117 C1orf112Q9NSG2 853 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 DNAI1Q9UI46 699 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 R3HCC1Q9Y3T6 440 aaKnown RBP22.19■■□□□ 1.14
TMEM53-207ENST00000468117 ZC3H11AO75152 810 aaKnown RBP eCLIP22.19■■□□□ 1.14
TMEM53-207ENST00000468117 VAV2P52735 878 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 CRYBB1P53674 252 aaPredicted RBP22.19■■□□□ 1.14
TMEM53-207ENST00000468117 AP3M2P53677 418 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 DUOXA2Q1HG44 320 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 WDR44Q5JSH3 913 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 VTI1AQ96AJ9 217 aa22.19■■□□□ 1.14
TMEM53-207ENST00000468117 FANCGO15287 622 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 B4GALT4O60513 344 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 IL18RAPO95256 599 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 NPTXRO95502 500 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 USP8P40818 1118 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 PRMT2P55345 433 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 NCOA4Q13772 614 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 PCBP1Q15365 356 aaKnown RBP eCLIP22.18■■□□□ 1.14
TMEM53-207ENST00000468117 CCDC122Q5T0U0 273 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 TRAPPC11Q7Z392 1133 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 JAKMIP2Q96AA8 810 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 WDR24Q96S15 920 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 CELF4Q9BZC1 486 aaKnown RBP22.18■■□□□ 1.14
TMEM53-207ENST00000468117 GUCA1BQ9UMX6 200 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 LACTBL1A8MY62 500 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 CST3P01034 146 aaPredicted RBP22.18■■□□□ 1.14
TMEM53-207ENST00000468117 MAGEA1P43355 309 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 ACLYP53396 1101 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 LHX8Q68G74 356 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 NOTUMQ6P988 496 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 SLC27A1Q6PCB7 646 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 SERINC5Q86VE9 423 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 FMNL3Q8IVF7 1028 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 KIF18AQ8NI77 898 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 SHC3Q92529 594 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 ARID3AQ99856 593 aa22.18■■□□□ 1.14
TMEM53-207ENST00000468117 MYH10P35580 1976 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 CLSTN1O94985 981 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 TUBB4AP04350 444 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 TMEM191BP0C7N4 346 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 CCDC172P0C7W6 258 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 MRPS6P82932 125 aaKnown RBP22.17■■□□□ 1.14
TMEM53-207ENST00000468117 GCNT1Q02742 428 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 SLC10A6Q3KNW5 377 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 DCAF4L1Q3SXM0 396 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 SESTD1Q86VW0 696 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 DHX38Q92620 1227 aaKnown RBP22.17■■□□□ 1.14
TMEM53-207ENST00000468117 EIF2AQ9BY44 585 aaKnown RBP22.17■■□□□ 1.14
TMEM53-207ENST00000468117 PIN4Q9Y237 131 aaKnown RBP22.17■■□□□ 1.14
TMEM53-207ENST00000468117 DUSP10Q9Y6W6 482 aa22.17■■□□□ 1.14
TMEM53-207ENST00000468117 KIF5CO60282 957 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 NFICP08651 508 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 KYAT1Q16773 422 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 FAM71AQ8IYT1 594 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 ZNF710Q8N1W2 664 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 SH3TC2Q8TF17 1288 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 ACAP3Q96P50 834 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 BEGAINQ9BUH8 593 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 APOBEC3GQ9HC16 384 aaKnown RBP22.16■■□□□ 1.14
TMEM53-207ENST00000468117 CDY2AQ9Y6F7 541 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 KRT86O43790 486 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 CTSHP09668 335 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 NOP14P78316 857 aaKnown RBP22.16■■□□□ 1.14
TMEM53-207ENST00000468117 KIF5AQ12840 1032 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 ITGA7Q13683 1181 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 PTGISQ16647 500 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 MROH7Q68CQ1 1323 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 JADE1Q6IE81 842 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 ZNF662Q6ZS27 426 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 RSPH3Q86UC2 560 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 ANKRD36BP1Q96IX9 119 aa22.16■■□□□ 1.14
TMEM53-207ENST00000468117 RALGAPA2Q2PPJ7 1873 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 M0QZ92 97 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 TNNC2P02585 160 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 GRM5P41594 1212 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 VPS36Q86VN1 386 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 OLIG1Q8TAK6 271 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 HES2Q9Y543 173 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 NUB1Q9Y5A7 615 aa22.15■■□□□ 1.14
TMEM53-207ENST00000468117 UMODL1Q5DID0 1318 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 CYP26A1O43174 497 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 MYL6P60660 151 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 POU5F1Q01860 360 aaKnown RBP22.14■■□□□ 1.14
TMEM53-207ENST00000468117 ZNF569Q5MCW4 686 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 ENOSF1Q7L5Y1 443 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 TMEM130Q8N3G9 435 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 SYT11Q9BT88 431 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 ASB7Q9H672 318 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 ACP6Q9NPH0 428 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 SNTG2Q9NY99 539 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms