RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TNNI1P19237 187 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 YARSP54577 528 aaKnown RBP7.43□□□□□ -1.22
SCAF4-204ENST00000467731 PPP2R3AQ06190 1150 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 PTPRJQ12913 1337 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 PSMD6Q15008 389 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 VWA3BQ502W6 1294 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 C1orf220Q5T0J3 134 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 CNKSR3Q6P9H4 555 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 SARM1Q6SZW1 724 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 RNF169Q8NCN4 708 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 XPO4Q9C0E2 1151 aaKnown RBP7.43□□□□□ -1.22
SCAF4-204ENST00000467731 NDST4Q9H3R1 872 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 TOPORSQ9NS56 1045 aaPredicted RBP7.43□□□□□ -1.22
SCAF4-204ENST00000467731 RNF19AQ9NV58 838 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
SCAF4-204ENST00000467731 PTPRSQ13332 1948 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.43□□□□□ -1.22
SCAF4-204ENST00000467731 LACTBL1A8MY62 500 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 ENPP3O14638 875 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 ITGA4P13612 1032 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 TNNT3P45378 269 aaPredicted RBP7.43□□□□□ -1.22
SCAF4-204ENST00000467731 PPP3CAQ08209 521 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 PTPN21Q16825 1174 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 CBWD6Q4V339 395 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 CBWD3Q5JTY5 395 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 CBWD5Q5RIA9 395 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 AGMOQ6ZNB7 445 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 USP37Q86T82 979 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 ECHDC2Q86YB7 292 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 TMC2Q8TDI7 906 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 SNX27Q96L92 541 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 INTS13Q9NVM9 706 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 KLK14Q9P0G3 267 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 SCN1AP35498 2009 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 CHD7Q9P2D1 2997 aa7.43□□□□□ -1.22
SCAF4-204ENST00000467731 FNDC1Q4ZHG4 1894 aaPredicted RBP7.43□□□□□ -1.22
SCAF4-204ENST00000467731 TEX33O43247 280 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 IL18RAPO95256 599 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 AFPP02771 609 aaKnown RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 SKIP12755 728 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 MLH1P40692 756 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 GCLMP48507 274 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 GTF2A1P52655 376 aaPredicted RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 MCCD1P59942 119 aaPredicted RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 CLDN10P78369 228 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 POU5F1Q01860 360 aaKnown RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 GABPB1Q06547 395 aaPredicted RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 IKBKEQ14164 716 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 GLRA4Q5JXX5 417 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 JADE1Q6IE81 842 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 ALKAL1Q6UXT8 129 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 MRPL10Q7Z7H8 261 aaKnown RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 ZNF598Q86UK7 904 aaKnown RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 EFCAB13Q8IY85 973 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 HACE1Q8IYU2 909 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 RPUSD2Q8IZ73 545 aaKnown RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 ZNF516Q92618 1163 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 ZMAT2Q96NC0 199 aaKnown RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 ASB7Q9H672 318 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 C1orf112Q9NSG2 853 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 CNTN3Q9P232 1028 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 LGALS16A8MUM7 142 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 PFKMP08237 780 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 NFICP08651 508 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 FMO5P49326 533 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 AFF1P51825 1210 aaKnown RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 FAM189BP81408 668 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 UBXN1Q04323 297 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 FPGSQ05932 587 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 NR1I3Q14994 352 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 SURF1Q15526 300 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 ZKSCAN8Q15776 578 aaPredicted RBP7.42□□□□□ -1.22
SCAF4-204ENST00000467731 FILIP1LQ4L180 1135 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 C16orf59Q7L2K0 433 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 OTOP2Q7RTS6 562 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 WDR49Q8IV35 697 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 OR5B17Q8NGF7 314 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 CGRRF1Q99675 332 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 MTMR12Q9C0I1 747 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 RSAD1Q9HA92 442 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 IL23AQ9NPF7 189 aa7.42□□□□□ -1.22
SCAF4-204ENST00000467731 ARL5CA6NH57 179 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 ADCY5O95622 1261 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 EOMESO95936 686 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 MXI1P50539 228 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TFAMQ00059 246 aaKnown RBP7.41□□□□□ -1.22
SCAF4-204ENST00000467731 ENPEPQ07075 957 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 CCDC173Q0VFZ6 552 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 PPIGQ13427 754 aaKnown RBP eCLIP7.41□□□□□ -1.228e-9■■□□□ 13.7
SCAF4-204ENST00000467731 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TMEM130Q8N3G9 435 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 GSTCDQ8NEC7 633 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 PGBD4Q96DM1 585 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 KIF12Q96FN5 646 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 GAD1Q99259 594 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TMEM117Q9H0C3 514 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 PLEKHA5Q9HAU0 1116 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TMEM161AQ9NX61 479 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 PLAGL2Q9UPG8 496 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms