RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 FAM102AQ5T9C2 384 aaPredicted RBP4.96□□□□□ -1.62
VPS50-209ENST00000467326 ZNF529Q6P280 563 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 SEM1Q6ZVN7 128 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 RHOUQ7L0Q8 258 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 MRGPREQ86SM8 312 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 CERS3Q8IU89 383 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 PROKR1Q8TCW9 393 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 LARP4BQ92615 738 aaKnown RBP4.96□□□□□ -1.62
VPS50-209ENST00000467326 RAB24Q969Q5 203 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 HDAC10Q969S8 669 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 SLC13A1Q9BZW2 595 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 TDP1Q9NUW8 608 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 FZD1Q9UP38 647 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 USP15Q9Y4E8 981 aaPredicted RBP4.96□□□□□ -1.62
VPS50-209ENST00000467326 TNKSO95271 1327 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 PNPLA7Q6ZV29 1317 aa4.96□□□□□ -1.62
VPS50-209ENST00000467326 MYBBP1AQ9BQG0 1328 aaKnown RBP4.96□□□□□ -1.62
VPS50-209ENST00000467326 hCG_2014768A0A024R1R8 64 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 DRGXA6NNA5 263 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 ZNF185O15231 689 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 ABHD16AO95870 558 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 ALAS1P13196 640 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 DDCP20711 480 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 ZFP36P26651 326 aaKnown RBP4.95□□□□□ -1.62
VPS50-209ENST00000467326 ATP8B2P98198 1209 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 CDC42EP1Q00587 391 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 SMN1Q16637 294 aaKnown RBP4.95□□□□□ -1.62
VPS50-209ENST00000467326 ATP2B3Q16720 1220 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 BRDTQ58F21 947 aaPredicted RBP4.95□□□□□ -1.62
VPS50-209ENST00000467326 AGAP9Q5VTM2 703 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 EFCAB2Q5VUJ9 269 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 MED25Q71SY5 747 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 RPUSD2Q8IZ73 545 aaKnown RBP4.95□□□□□ -1.62
VPS50-209ENST00000467326 OR56A1Q8NGH5 318 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 MYOCQ99972 504 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 MLST8Q9BVC4 326 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 TEX101Q9BY14 249 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 AKIP1Q9NQ31 210 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 C11orf21Q9P2W6 132 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 SLC23A1Q9UHI7 598 aa4.95□□□□□ -1.62
VPS50-209ENST00000467326 CCDC154A6NI56 674 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 HTRA2O43464 458 aaPredicted RBP4.94□□□□□ -1.62
VPS50-209ENST00000467326 SGTAO43765 313 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 POMCP01189 267 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 CCND1P24385 295 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 ADKP55263 362 aaKnown RBP4.94□□□□□ -1.62
VPS50-209ENST00000467326 TARDBPQ13148 414 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS50-209ENST00000467326 BEAN1Q3B7T3 259 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 UAP1L1Q3KQV9 507 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 C3orf36Q3SXR2 165 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 LY6G5CQ5SRR4 150 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 NOL8Q76FK4 1167 aaKnown RBP4.94□□□□□ -1.62
VPS50-209ENST00000467326 UBE3BQ7Z3V4 1068 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 RSPH3Q86UC2 560 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 RHOT2Q8IXI1 618 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 MYEOVQ96EZ4 313 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 TMX3Q96JJ7 454 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 REXO4Q9GZR2 422 aaKnown RBP4.94□□□□□ -1.62
VPS50-209ENST00000467326 FBXO34Q9NWN3 711 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 SERPINB13Q9UIV8 391 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 SPEF1Q9Y4P9 236 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 IPPQ9Y573 584 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 PCDHA13Q9Y5I0 950 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 HS3ST4Q9Y661 456 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 FPGT-TNNI3KV9GXZ4 949 aa4.94□□□□□ -1.62
VPS50-209ENST00000467326 WDR33Q9C0J8 1336 aaKnown RBP4.94□□□□□ -1.62
VPS50-209ENST00000467326 MARCH11A6NNE9 402 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 LPXNO60711 386 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 HLA-DOAP06340 250 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 SLC6A2P23975 617 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 ANAPC15P60006 121 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 MXRA7P84157 204 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 CREMQ03060 361 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 ODF1Q14990 250 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 DACT2Q5SW24 774 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 METRNLQ641Q3 311 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 ZNF627Q7L945 461 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 ZBTB46Q86UZ6 589 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 LDLRAD3Q86YD5 345 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 IFI44Q8TCB0 444 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 COA7Q96BR5 231 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 C11orf54Q9H0W9 315 aaPredicted RBP4.93□□□□□ -1.62
VPS50-209ENST00000467326 FAM30AQ9NZY2 134 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.93□□□□□ -1.62
VPS50-209ENST00000467326 LIMCH1Q9UPQ0 1083 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 ATP11BQ9Y2G3 1177 aa4.93□□□□□ -1.62
VPS50-209ENST00000467326 CENPVL1A0A0U1RR11 272 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 CDHR4A6H8M9 788 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 KIAA0391O15091 583 aaKnown RBP4.92□□□□□ -1.62
VPS50-209ENST00000467326 SNUPNO95149 360 aaKnown RBP4.92□□□□□ -1.62
VPS50-209ENST00000467326 NDUFA10O95299 355 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 GCSHP23434 173 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 EDNRBP24530 442 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 DDX6P26196 483 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS50-209ENST00000467326 RECQLP46063 649 aaPredicted RBP4.92□□□□□ -1.62
VPS50-209ENST00000467326 INHBCP55103 352 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 INHBEP58166 350 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 CTXN1P60606 82 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 IL10RAQ13651 578 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 UBXN2BQ14CS0 331 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms