RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 TTC12Q9H892 705 aaPredicted RBP6.31□□□□□ -1.4
CXXC4-202ENST00000466963 PLEKHA5Q9HAU0 1116 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 ASAH2Q9NR71 780 aa6.31□□□□□ -1.4
CXXC4-202ENST00000466963 TSPAN1O60635 241 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 CDKL5O76039 1030 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 HOXA11P31270 313 aaPredicted RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 FXR2P51116 673 aaKnown RBP eCLIP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ZNF132P52740 706 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 LAMTOR4Q0VGL1 99 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 SNW1Q13573 536 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ITPRIPL2Q3MIP1 535 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 USP39Q53GS9 565 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 APOA5Q6Q788 366 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 PADI6Q6TGC4 694 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 NUDT18Q6ZVK8 323 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 TRIM22Q8IYM9 498 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 RNF169Q8NCN4 708 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 BCL7CQ8WUZ0 217 aaPredicted RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ZCCHC14Q8WYQ9 949 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 SPACA7Q96KW9 195 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 TBC1D32Q96NH3 1257 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 NACC1Q96RE7 527 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 APOL5Q9BWW9 433 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 UXTQ9UBK9 157 aaPredicted RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ZMIZ1Q9ULJ6 1067 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 GINS2Q9Y248 185 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 PIAS3Q9Y6X2 628 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 MYO10Q9HD67 2058 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 FAM205CA6NFA0 338 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 POTEMA6NI47 508 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 NPC1O15118 1278 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 RHOP08100 348 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 SYPP08247 313 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 KCNE1P15382 129 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 FCARP24071 287 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ARL2P36404 184 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 MPLP40238 635 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 PPP3CCP48454 512 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 TRAPPC10P48553 1259 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ANTXR2P58335 489 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 MRPS21P82921 87 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 POTEGQ6S5H5 508 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 LENG9Q96B70 501 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 CLSTN3Q9BQT9 956 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 TUFT1Q9NNX1 390 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 PCDHB8Q9UN66 801 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 RBM19Q9Y4C8 960 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 SUPT16HQ9Y5B9 1047 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 DCDC2BA2VCK2 349 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 EIF4E1BA6NMX2 242 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 FAM86B1E9PN63 330 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ARNTLO00327 626 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 FAM86B2P0C5J1 330 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 IFNAR1P17181 557 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 CHMLP26374 656 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 TUFMP49411 452 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 YARSP54577 528 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 EPHB3P54753 998 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 RBM10P98175 930 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 INAVAQ3KP66 663 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 GRASPQ7Z6J2 395 aaPredicted RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 CPA6Q8N4T0 437 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 DCLK2Q8N568 766 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 FGF14Q92915 247 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 NUSAP1Q9BXS6 441 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 NXF3Q9H4D5 531 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 APOBEC2Q9Y235 224 aaKnown RBP6.3□□□□□ -1.4
CXXC4-202ENST00000466963 DERAQ9Y315 318 aa6.3□□□□□ -1.4
CXXC4-202ENST00000466963 ZDBF2Q9HCK1 2354 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 STK36Q9NRP7 1315 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 DPYSL4O14531 572 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 CAPN9O14815 690 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 AXIN1O15169 862 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 MSH4O15457 936 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 FAM163BP0C2L3 166 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 PSMA5P28066 241 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 ZNF252P-AS1Q0IIN9 211 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 EMC2Q15006 297 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 UBE2SQ16763 222 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 PIP4P1Q86T03 277 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 RHPN2Q8IUC4 686 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 KCNB2Q92953 911 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 CCDC136Q96JN2 1154 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 FZD8Q9H461 694 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 FAM124BQ9H5Z6 455 aaPredicted RBP6.29□□□□□ -1.4
CXXC4-202ENST00000466963 TMEM134Q9H6X4 195 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 DNMT3BQ9UBC3 853 aaKnown RBP6.29□□□□□ -1.4
CXXC4-202ENST00000466963 DNAJB4Q9UDY4 337 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 PCDHA4Q9UN74 947 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 INPP5FQ9Y2H2 1132 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 GOLGA8AA7E2F4 631 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 GOLGA8BA8MQT2 603 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 DFNA5O60443 496 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 NAMPTP43490 491 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 C19orf57Q0VDD7 668 aa6.29□□□□□ -1.4
CXXC4-202ENST00000466963 CCINQ13939 588 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms