RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 CAPRIN2Q6IMN6 1127 aaKnown RBP16.54■□□□□ 0.24
SNED1-208ENST00000466618 CCHCR1Q8TD31 782 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 SAAL1Q96ER3 474 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 MCOLN1Q9GZU1 580 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 AZI2Q9H6S1 392 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 FAM207AQ9NSI2 230 aaPredicted RBP16.54■□□□□ 0.24
SNED1-208ENST00000466618 ZBTB39O15060 712 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 DKC1O60832 514 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNED1-208ENST00000466618 F2P00734 622 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 RNASE9P60153 205 aaKnown RBP16.54■□□□□ 0.24
SNED1-208ENST00000466618 MAGOHP61326 146 aaKnown RBP16.54■□□□□ 0.24
SNED1-208ENST00000466618 PURAQ00577 322 aaKnown RBP16.54■□□□□ 0.24
SNED1-208ENST00000466618 LRRC41Q15345 812 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 ERMARDQ5T6L9 678 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 FAM114A1Q8IWE2 563 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 USP38Q8NB14 1042 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 CCDC197Q8NCU1 140 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 CCDC26Q8TAB7 109 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 BAP1Q92560 729 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 MAGOHBQ96A72 148 aaKnown RBP16.54■□□□□ 0.24
SNED1-208ENST00000466618 LRRC45Q96CN5 670 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 CHMP6Q96FZ7 201 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 NACC1Q96RE7 527 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 HOMER3Q9NSC5 361 aa16.54■□□□□ 0.24
SNED1-208ENST00000466618 KPNA6O60684 536 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 CLTAP09496 248 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 ZNF286BP0CG31 522 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 FLT3P36888 993 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 TNNC1P63316 161 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 PRKCEQ02156 737 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 CUL1Q13616 776 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 MEI1Q5TIA1 1274 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 ANO5Q75V66 913 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 DDX42Q86XP3 938 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNED1-208ENST00000466618 GLG1Q92896 1179 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 CDK5RAP3Q96JB5 506 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 STK17AQ9UEE5 414 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 FBXL5Q9UKA1 691 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 OGDHLQ9ULD0 1010 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 PACSIN2Q9UNF0 486 aaPredicted RBP16.53■□□□□ 0.24
SNED1-208ENST00000466618 ENO4A6NNW6 628 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 E9PMD0 336 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 H3BRB1 525 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 HAS3O00219 553 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 MYCP01106 439 aaPredicted RBP16.53■□□□□ 0.24
SNED1-208ENST00000466618 ZNF268Q14587 947 aaPredicted RBP16.53■□□□□ 0.24
SNED1-208ENST00000466618 HGSNATQ68CP4 663 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 RNF180Q86T96 592 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 PIGOQ8TEQ8 1089 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 ZBTB10Q96DT7 871 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 DEFB118Q96PH6 123 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 ZNF317Q96PQ6 595 aaPredicted RBP16.53■□□□□ 0.24
SNED1-208ENST00000466618 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
SNED1-208ENST00000466618 FAM129AQ9BZQ8 928 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 CUEDC2Q9H467 287 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 TUT1Q9H6E5 874 aaKnown RBP16.53■□□□□ 0.24
SNED1-208ENST00000466618 KBTBD4Q9NVX7 518 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 ERAP1Q9NZ08 941 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
SNED1-208ENST00000466618 RBAK-RBAKDNI3L0D1 243 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 OATP04181 439 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 YWHABP31946 246 aaKnown RBP16.52■□□□□ 0.24
SNED1-208ENST00000466618 SLMAPQ14BN4 828 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 KCNA10Q16322 511 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 XKR3Q5GH77 459 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 TBC1D1Q86TI0 1168 aaPredicted RBP16.52■□□□□ 0.24
SNED1-208ENST00000466618 MDM1Q8TC05 714 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 RAD54LQ92698 747 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 NIFKQ9BYG3 293 aaKnown RBP16.52■□□□□ 0.24
SNED1-208ENST00000466618 CRISPLD2Q9H0B8 497 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 RNPEPQ9H4A4 650 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 ANKEF1Q9NU02 776 aa16.52■□□□□ 0.24
SNED1-208ENST00000466618 NOP53Q9NZM5 478 aaKnown RBP16.52■□□□□ 0.24
SNED1-208ENST00000466618 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
SNED1-208ENST00000466618 CORO1CQ9ULV4 474 aaPredicted RBP16.52■□□□□ 0.24
SNED1-208ENST00000466618 BICDL2A1A5D9 508 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 AP1G2O75843 785 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 EYA4O95677 639 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 GJB1P08034 283 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 SPDYE1Q8NFV5 336 aaPredicted RBP16.51■□□□□ 0.23
SNED1-208ENST00000466618 ATP8B4Q8TF62 1192 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 UBLCP1Q8WVY7 318 aaPredicted RBP16.51■□□□□ 0.23
SNED1-208ENST00000466618 CENPTQ96BT3 561 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 TLCD1Q96CP7 247 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 TSEN34Q9BSV6 310 aaKnown RBP16.51■□□□□ 0.23
SNED1-208ENST00000466618 AGAP1Q9UPQ3 857 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 PCDHGC5Q9Y5F6 944 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 SSU72P8A0A1W2PR75 194 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 TMEM150BA6NC51 233 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 SNUPNO95149 360 aaKnown RBP16.51■□□□□ 0.23
SNED1-208ENST00000466618 MYL1P05976 194 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 ASGR1P07306 291 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 MYL3P08590 195 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 RARRES1P49788 294 aa16.51■□□□□ 0.23
SNED1-208ENST00000466618 SLC12A3P55017 1021 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms