RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 DUSP6Q16828 381 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 ZBTB41Q5SVQ8 909 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 PDE12Q6L8Q7 609 aaKnown RBP10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 KIAA1841Q6NSI8 718 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 CLEC17AQ6ZS10 378 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 TAS1R1Q7RTX1 841 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 CEP57Q86XR8 500 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 MAP4K3Q8IVH8 894 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 CEP57L1Q8IYX8 460 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 EFHBQ8N7U6 833 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 VN1R2Q8NFZ6 395 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 UHRF1Q96T88 793 aaPredicted RBP10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 MSTO1Q9BUK6 570 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 HERC2P3Q9BVR0 1158 aa10.63□□□□□ -0.71
RTFDC1-205ENST00000466260 SMIM28A0A1B0GU29 152 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 CARNS1A5YM72 827 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 I3L4J1 428 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 CLASP2O75122 1294 aaKnown RBP10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 SOD2P04179 222 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 IGFBP6P24592 240 aaPredicted RBP10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 GLUD2P49448 558 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 CLCNKBP51801 687 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 GTF2BQ00403 316 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 AMPD3Q01432 767 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 MCL1Q07820 350 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 KCNA1Q09470 495 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 ADAM15Q13444 863 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 PTPN14Q15678 1187 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 NAB2Q15742 525 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 LEXMQ3ZCV2 418 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 ADALQ6DHV7 355 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 ZNF720Q7Z2F6 126 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 MRPL43Q8N983 215 aaKnown RBP10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 GLIS3Q8NEA6 775 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 POMGNT1Q8WZA1 660 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 C18orf25Q96B23 403 aaPredicted RBP10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 ZMAT2Q96NC0 199 aaKnown RBP10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 PPP1R10Q96QC0 940 aaKnown RBP10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 GPR62Q9BZJ7 368 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 TRIM9Q9C026 710 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 LRRC27Q9C0I9 530 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 CUEDC2Q9H467 287 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 MRPL17Q9NRX2 175 aaKnown RBP10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 SEL1LQ9UBV2 794 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 TUBGCP4Q9UGJ1 667 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 CD207Q9UJ71 328 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 ADAM28Q9UKQ2 775 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 KCNH3Q9ULD8 1083 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 HCFC2Q9Y5Z7 792 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 ZMYM2Q9UBW7 1377 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 XIRP2A4UGR9 3374 aa10.62□□□□□ -0.71
RTFDC1-205ENST00000466260 GOLGA6L3A6NEY3 463 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 OGTO15294 1046 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 MEFVO15553 781 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 MBTPS2O43462 519 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 NCK2O43639 380 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 B3GAT3O94766 335 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 PIGRP01833 764 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 SRGAP2BP0DMP2 458 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 BMP1P13497 986 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 EPCAMP16422 314 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 RPL17P18621 184 aaKnown RBP10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 KLRC2P26717 231 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 BRCC3P46736 316 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 ACOT2P49753 483 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 GUCY2FP51841 1108 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 PPP2R3AQ06190 1150 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 SOX4Q06945 474 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 CUL4BQ13620 913 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 SLC10A6Q3KNW5 377 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 FAM171A1Q5VUB5 890 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 PRSS55Q6UWB4 352 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 FSIP1Q8NA03 581 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 TMC2Q8TDI7 906 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 RIN2Q8WYP3 895 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 SAAL1Q96ER3 474 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 KLHL5Q96PQ7 755 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 ACCSQ96QU6 501 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 CDCA3Q99618 268 aaPredicted RBP10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 RPF1Q9H9Y2 349 aaKnown RBP10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 KBTBD4Q9NVX7 518 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 CLEC1BQ9P126 229 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 CDH22Q9UJ99 828 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 EXOC7Q9UPT5 735 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 TSC2P49815 1807 aa10.61□□□□□ -0.71
RTFDC1-205ENST00000466260 SF3B1O75533 1304 aaKnown RBP eCLIP10.6□□□□□ -0.718e-6■■■■■ 107
RTFDC1-205ENST00000466260 SCN1AP35498 2009 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 FRMD3A2A2Y4 597 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 GOLGA8IPA6NC78 632 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 GOLGA8JA6NMD2 632 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 LACTBL1A8MY62 500 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 PODXLO00592 558 aa10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-205ENST00000466260 CLTAP09496 248 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms