RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 KIR2DL3P43628 341 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 RAB27AP51159 221 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 SLC16A1P53985 500 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 ADKP55263 362 aaKnown RBP5.65□□□□□ -1.5
LRCH3-211ENST00000466054 ADAM8P78325 824 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 ODF1Q14990 250 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 NFE2Q16621 373 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-211ENST00000466054 APBB1IPQ7Z5R6 666 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-211ENST00000466054 GPR156Q8NFN8 814 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 SNX33Q8WV41 574 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 NUP88Q99567 741 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-211ENST00000466054 SLC46A2Q9BY10 475 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 CDH19Q9H159 772 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 KCNH6Q9H252 994 aa5.65□□□□□ -1.5
LRCH3-211ENST00000466054 RBM12Q9NTZ6 932 aaKnown RBP5.65□□□□□ -1.5
LRCH3-211ENST00000466054 RPTORQ8N122 1335 aa5.65□□□□□ -1.51
LRCH3-211ENST00000466054 NRP1O14786 923 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 RFPL1O75677 317 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 C5AR1P21730 350 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 CTSSP25774 331 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 MCAMP43121 646 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 CCT2P78371 535 aaKnown RBP5.64□□□□□ -1.51
LRCH3-211ENST00000466054 CMTM4Q8IZR5 234 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 CPPED1Q9BRF8 314 aaPredicted RBP5.64□□□□□ -1.51
LRCH3-211ENST00000466054 ADI1Q9BV57 179 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 SLC29A3Q9BZD2 475 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 ZNF768Q9H5H4 540 aaKnown RBP5.64□□□□□ -1.51
LRCH3-211ENST00000466054 SAP30BPQ9UHR5 308 aaKnown RBP5.64□□□□□ -1.51
LRCH3-211ENST00000466054 TUBD1Q9UJT1 453 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 PNMA8BQ9ULN7 279 aaPredicted RBP5.64□□□□□ -1.51
LRCH3-211ENST00000466054 G3BP2Q9UN86 482 aaKnown RBP5.64□□□□□ -1.51
LRCH3-211ENST00000466054 ANKRD6Q9Y2G4 727 aa5.64□□□□□ -1.51
LRCH3-211ENST00000466054 ALDH1A2O94788 518 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 HKR1P10072 659 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 ZSCAN20P17040 1043 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-211ENST00000466054 UBE3CQ15386 1083 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 PRR16Q569H4 304 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 RIN2Q8WYP3 895 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-211ENST00000466054 HSPBAP1Q96EW2 488 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 SLC2A13Q96QE2 648 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 RHOBTB2Q9BYZ6 727 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 TRPM5Q9NZQ8 1165 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 ZIM2Q9NZV7 527 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 IP6K2Q9UHH9 426 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 ZNF180Q9UJW8 692 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 FRMD4BQ9Y2L6 1034 aa5.63□□□□□ -1.51
LRCH3-211ENST00000466054 FAM171A2A8MVW0 826 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 PRAMEF4O60810 478 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 ZRANB2O95218 330 aaKnown RBP eCLIP5.62□□□□□ -1.51
LRCH3-211ENST00000466054 GASTP01350 101 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 CT47B1P0C2W7 299 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-211ENST00000466054 U2AF1L5P0DN76 240 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-211ENST00000466054 AKAP5P24588 427 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 PTH2RP49190 550 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 U2AF1Q01081 240 aaKnown RBP eCLIP5.62□□□□□ -1.51
LRCH3-211ENST00000466054 MGAT2Q10469 447 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 PPP2R5AQ15172 486 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 MIER2Q8N344 545 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 RTFDC1Q9BY42 306 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-211ENST00000466054 PRDM13Q9H4Q3 707 aa5.62□□□□□ -1.51
LRCH3-211ENST00000466054 RNASET2O00584 256 aaKnown RBP5.61□□□□□ -1.51
LRCH3-211ENST00000466054 AKR1B10O60218 316 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 ENDOD1O94919 500 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 IL33O95760 270 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 PF4V1P10720 104 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 GSPT1P15170 499 aaKnown RBP5.61□□□□□ -1.51
LRCH3-211ENST00000466054 CRHR1P34998 444 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 KIF23Q02241 960 aaPredicted RBP5.61□□□□□ -1.51
LRCH3-211ENST00000466054 PPP3CAQ08209 521 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 MST1LQ2TV78 715 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 ABHD15Q6UXT9 468 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 RAVER1Q8IY67 606 aaKnown RBP5.61□□□□□ -1.51
LRCH3-211ENST00000466054 CHPFQ8IZ52 775 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 MSL3Q8N5Y2 521 aaKnown RBP5.61□□□□□ -1.51
LRCH3-211ENST00000466054 PPM1NQ8N819 430 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 SCARB1Q8WTV0 552 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 ZNF480Q8WV37 535 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 JPH3Q8WXH2 748 aaPredicted RBP5.61□□□□□ -1.51
LRCH3-211ENST00000466054 COA7Q96BR5 231 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 COQ10AQ96MF6 247 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 BRIP1Q9BX63 1249 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 ING3Q9NXR8 418 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 HDAC5Q9UQL6 1122 aa5.61□□□□□ -1.51
LRCH3-211ENST00000466054 NDUFA10O95299 355 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 ZFP36P26651 326 aaKnown RBP5.6□□□□□ -1.51
LRCH3-211ENST00000466054 ECHS1P30084 290 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 CYP2C19P33261 490 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 DUSP2Q05923 314 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 NXNQ6DKJ4 435 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 CXorf57Q6NSI4 855 aaKnown RBP5.6□□□□□ -1.51
LRCH3-211ENST00000466054 ARHGEF19Q8IW93 802 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 SIMC1Q8NDZ2 872 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 HOXB13Q92826 284 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-211ENST00000466054 BCO1Q9HAY6 547 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 AKIP1Q9NQ31 210 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 TLK1Q9UKI8 766 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 DNM3Q9UQ16 869 aa5.6□□□□□ -1.51
LRCH3-211ENST00000466054 AHRRA9YTQ3 701 aa5.59□□□□□ -1.51
LRCH3-211ENST00000466054 TSPAN6O43657 245 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms