RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 FGD4Q96M96 766 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 DEFB118Q96PH6 123 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 APBA2Q99767 749 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 SLC38A10Q9HBR0 1119 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 ZNF287Q9HBT7 754 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 RBM8AQ9Y5S9 174 aaKnown RBP5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 ASTN1O14525 1302 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 RAD50Q92878 1312 aa5.62□□□□□ -1.51
EXOSC3-204ENST00000465860 AURKAO14965 403 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 ATP2A1O14983 1001 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 ADCY6O43306 1168 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 TNKSO95271 1327 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 SGPL1O95470 568 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 EPHX1P07099 455 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 GJB1P08034 283 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 HOXC6P09630 235 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 PDHBP11177 359 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 TOP1P11387 765 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 CYBAP13498 195 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 PFKLP17858 780 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 PTGS1P23219 599 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 STAT3P40763 770 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 RGS2P41220 211 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 GJA8P48165 433 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 STAT2P52630 851 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 CORO7P57737 925 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 UBXN2AP68543 259 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 CCNA1P78396 465 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 CNTN2Q02246 1040 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 LAMA3Q16787 3333 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 IMMTQ16891 758 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 CCDC96Q2M329 555 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 CCDC174Q6PII3 467 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 BTNL9Q6UXG8 535 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 ZDHHC14Q8IZN3 488 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 RPTORQ8N122 1335 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 C19orf47Q8N9M1 422 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 SOCS4Q8WXH5 440 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 KLHL6Q8WZ60 621 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 ESR2Q92731 530 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 GPRASP2Q96D09 838 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 MAML3Q96JK9 1138 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 SPATA32Q96LK8 384 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 UBA5Q9GZZ9 404 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 HOMER2Q9NSB8 354 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 FEM1BQ9UK73 627 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 SYNPO2Q9UMS6 1093 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 SLC12A7Q9Y666 1083 aa5.61□□□□□ -1.51
EXOSC3-204ENST00000465860 DOCK5Q9H7D0 1870 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 LAMA2P24043 3122 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 PFASO15067 1338 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 ZC3H12DA2A288 527 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 STXBP3O00186 592 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 FFAR3O14843 346 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 SLC27A2O14975 620 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 ZBED4O75132 1171 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 SNAI1O95863 264 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 CPA1P15085 419 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 ZKSCAN1P17029 563 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 PRR5P85299 388 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 SLC7A5Q01650 507 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 ZNF543Q08ER8 600 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 IKQ13123 557 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 NECTIN1Q15223 517 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 DPY19L1Q2PZI1 675 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 ADCK5Q3MIX3 580 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 TMEM63BQ5T3F8 832 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 HEATR6Q6AI08 1181 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 DPP9Q86TI2 863 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 CCAR1Q8IX12 1150 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 MB21D2Q8IYB1 491 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 RGS22Q8NE09 1264 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 IGDCC4Q8TDY8 1250 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 DCAF4Q8WV16 495 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 RUFY2Q8WXA3 655 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 TBC1D5Q92609 795 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 ANKS1AQ92625 1134 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 MMP19Q99542 508 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 MYL10Q9BUA6 226 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 TEX13BQ9BXU2 312 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 LRRC2Q9BYS8 371 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 GBP3Q9H0R5 595 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 RANBP17Q9H2T7 1088 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 RNF41Q9H4P4 317 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 MROH8Q9H579 483 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 LUC7LQ9NQ29 371 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 CTNNA3Q9UI47 895 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 MAD2L2Q9UI95 211 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 ISY1Q9ULR0 285 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 KIAA1217Q5T5P2 1943 aa5.6□□□□□ -1.51
EXOSC3-204ENST00000465860 MYH7BA7E2Y1 1941 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 STRNO43815 780 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 PLA2G6O60733 806 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 PPP1R11O60927 126 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 SLC25A27O95847 323 aa5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 TFRCP02786 760 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-204ENST00000465860 PLA2G1BP04054 148 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms