RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 FRMD4BQ9Y2L6 1034 aa9.59□□□□□ -0.87
UBA3-208ENST00000465627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
UBA3-208ENST00000465627 BRWD1Q9NSI6 2320 aa9.59□□□□□ -0.87
UBA3-208ENST00000465627 USP24Q9UPU5 2620 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 A0A1B0GUA9 196 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 A0A1W2PQJ5 194 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 TTC26A0AVF1 554 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 GOLGA8IPA6NC78 632 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 MOXD2PA6NHM9 499 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 GOLGA8JA6NMD2 632 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 GOLGA6L6A8MZA4 724 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 ZEB2O60315 1214 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 TSPAN1O60635 241 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 MFAP3LO75121 409 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 CSDE1O75534 798 aaKnown RBP9.58□□□□□ -0.88
UBA3-208ENST00000465627 CABYRO75952 493 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 GNAT1P11488 350 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 DARSP14868 501 aaKnown RBP9.58□□□□□ -0.88
UBA3-208ENST00000465627 FMO5P49326 533 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 PTPN11Q06124 597 aaPredicted RBP9.58□□□□□ -0.88
UBA3-208ENST00000465627 RBL2Q08999 1139 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 MGAT3Q09327 533 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 LRMPQ12912 555 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 CBWD6Q4V339 395 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 CBWD3Q5JTY5 395 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 CBWD5Q5RIA9 395 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 TAF2Q6P1X5 1199 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 RNF180Q86T96 592 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 DRC7Q8IY82 874 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 C7orf31Q8N865 590 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 CCDC150Q8NCX0 1101 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 TMEM40Q8WWA1 233 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 DNAJB3Q8WWF6 145 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 POMGNT1Q8WZA1 660 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 BAP1Q92560 729 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 DHX38Q92620 1227 aaKnown RBP9.58□□□□□ -0.88
UBA3-208ENST00000465627 MAP7D2Q96T17 732 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 GANQ9H2C0 597 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 PDZD7Q9H5P4 517 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 KIAA1586Q9HCI6 787 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 PLCB1Q9NQ66 1216 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 CPSF3Q9UKF6 684 aaKnown RBP9.58□□□□□ -0.88
UBA3-208ENST00000465627 AGO2Q9UKV8 859 aaKnown RBP9.58□□□□□ -0.88
UBA3-208ENST00000465627 PHF24Q9UPV7 400 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 AKT3Q9Y243 479 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 COQ4Q9Y3A0 265 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 RALGAPA2Q2PPJ7 1873 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 MAST4O15021 2626 aa9.58□□□□□ -0.88
UBA3-208ENST00000465627 MYO15AQ9UKN7 3530 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 PLXNA3P51805 1871 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 GBF1Q92538 1859 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 LRRIQ3A6PVS8 624 aaPredicted RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 INO80B-WBP1J3KQ70 363 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 OGTO15294 1046 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 P4HA2O15460 535 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 TRIM49P0CI25 452 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 TRIM49CP0CI26 452 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 ARF4P18085 180 aaPredicted RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 PON1P27169 355 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 HNRNPH3P31942 346 aaKnown RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 CDK7P50613 346 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 VAMP7P51809 220 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 POU5F1Q01860 360 aaKnown RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 GOLGA8FQ08AF8 430 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 GOLGA8DPQ0D2H9 430 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 PRPF4BQ13523 1007 aaKnown RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 TRIM14Q14142 442 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 PSMD6Q15008 389 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 SNX17Q15036 470 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 PCBP1Q15365 356 aaKnown RBP eCLIP9.57□□□□□ -0.88
UBA3-208ENST00000465627 KIZQ2M2Z5 673 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 EPC2Q52LR7 807 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 ATF7IP2Q5U623 682 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 MPZL3Q6UWV2 235 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 MICALL1Q8N3F8 863 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 PRSS33Q8NF86 280 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 BADQ92934 168 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 TIFAQ96CG3 184 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 IQCDQ96DY2 449 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 ZNF830Q96NB3 372 aaPredicted RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 PANX2Q96RD6 677 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 DNAJC7Q99615 494 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 NAA15Q9BXJ9 866 aaKnown RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 EDEM3Q9BZQ6 932 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 INO80BQ9C086 356 aaPredicted RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 FAM49AQ9H0Q0 323 aaPredicted RBP9.57□□□□□ -0.88
UBA3-208ENST00000465627 CDT1Q9H211 546 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 FBXL5Q9UKA1 691 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 ZKSCAN5Q9Y2L8 839 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.57□□□□□ -0.886e-7■■■□□ 14.9
UBA3-208ENST00000465627 CACNA1HO95180 2353 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 PTPRJQ12913 1337 aa9.57□□□□□ -0.88
UBA3-208ENST00000465627 A0A1W2PQ45 241 aaPredicted RBP9.56□□□□□ -0.88
UBA3-208ENST00000465627 A0A1W2PQY0 241 aa9.56□□□□□ -0.88
UBA3-208ENST00000465627 ZNF233A6NK53 670 aa9.56□□□□□ -0.88
UBA3-208ENST00000465627 CLDN3O15551 220 aa9.56□□□□□ -0.88
UBA3-208ENST00000465627 LDHAP00338 332 aaKnown RBP9.56□□□□□ -0.88
UBA3-208ENST00000465627 TPM2P07951 284 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms