RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 EMC2Q15006 297 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 PRSS36Q5K4E3 855 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 TXNDC11Q6PKC3 985 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 RDM1Q8NG50 284 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 GATA6Q92908 595 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 IRF7Q92985 503 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 ASB16Q96NS5 453 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 JPH2Q9BR39 696 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-214ENST00000465269 IER2Q9BTL4 223 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 ADAM33Q9BZ11 813 aa16.64■□□□□ 0.25
HDAC6-214ENST00000465269 POLR3BQ9NW08 1133 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-214ENST00000465269 EXTL3O43909 919 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 FOXD2O60548 495 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-214ENST00000465269 EPN2O95208 641 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 PTENP60484 403 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 MBTD1Q05BQ5 628 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 TUSC3Q13454 348 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 RNF43Q68DV7 783 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 KIAA1211LQ6NV74 962 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 PKN3Q6P5Z2 889 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 HS6ST3Q8IZP7 471 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 ZCCHC14Q8WYQ9 949 aaKnown RBP16.63■□□□□ 0.25
HDAC6-214ENST00000465269 RSPRY1Q96DX4 576 aa16.63■□□□□ 0.25
HDAC6-214ENST00000465269 WDR27A2RRH5 827 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 C4orf47A7E2U8 309 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 ARNTLO00327 626 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 PTGESO14684 152 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 PSMC3P17980 439 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 UVSSAQ2YD98 709 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 WDR5BQ86VZ2 330 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 ETNPPLQ8TBG4 499 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 CCDC51Q96ER9 411 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 SCNM1Q9BWG6 230 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 XPNPEP1Q9NQW7 623 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 VPS54Q9P1Q0 977 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 MTRRQ9UBK8 725 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 CACNA1EQ15878 2313 aa16.62■□□□□ 0.25
HDAC6-214ENST00000465269 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
HDAC6-214ENST00000465269 MOSPD3O75425 235 aa16.61■□□□□ 0.25
HDAC6-214ENST00000465269 PTPN2P17706 415 aa16.61■□□□□ 0.25
HDAC6-214ENST00000465269 TKTP29401 623 aaKnown RBP16.61■□□□□ 0.25
HDAC6-214ENST00000465269 AXLP30530 894 aa16.61■□□□□ 0.25
HDAC6-214ENST00000465269 RAP1GAPP47736 663 aa16.61■□□□□ 0.25
HDAC6-214ENST00000465269 EXOSC10Q01780 885 aaKnown RBP16.61■□□□□ 0.25
HDAC6-214ENST00000465269 PLA2G2CQ5R387 149 aa16.61■□□□□ 0.25
HDAC6-214ENST00000465269 USP20Q9Y2K6 914 aa16.61■□□□□ 0.25
HDAC6-214ENST00000465269 TTLL13PA6NNM8 815 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 ZNF263O14978 683 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 RPP40O75818 363 aaKnown RBP16.6■□□□□ 0.25
HDAC6-214ENST00000465269 PAPSS2O95340 614 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-214ENST00000465269 GNA11P29992 359 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 MPLP40238 635 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 QARSP47897 775 aaKnown RBP16.6■□□□□ 0.25
HDAC6-214ENST00000465269 USP11P51784 963 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 ARPP19P56211 112 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-214ENST00000465269 CAPSQ13938 189 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 NECTIN1Q15223 517 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 NAB2Q15742 525 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 Q4G0T1 1027 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 SH3PXD2AQ5TCZ1 1133 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 SMARCD2Q92925 531 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 EDEM2Q9BV94 578 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 AVENQ9NQS1 362 aaPredicted RBP16.6■□□□□ 0.25
HDAC6-214ENST00000465269 SNTG2Q9NY99 539 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 RGL1Q9NZL6 768 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 ATG2BQ96BY7 2078 aa16.6■□□□□ 0.25
HDAC6-214ENST00000465269 HEPACAM2A8MVW5 462 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 SLC37A4O43826 429 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 SEC24AO95486 1093 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 LRG1P02750 347 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 CPA1P15085 419 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 FGFR3P22607 806 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 RFC5P40937 340 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 KPNA1P52294 538 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-214ENST00000465269 ROR1Q01973 937 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 LRRC32Q14392 662 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 PON2Q15165 354 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 XKR9Q5GH70 373 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 SLC27A1Q6PCB7 646 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 CD300LGQ6UXG3 332 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-214ENST00000465269 CACNA2D4Q7Z3S7 1137 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 HACE1Q8IYU2 909 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 ZSCAN18Q8TBC5 510 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-214ENST00000465269 CCDC12Q8WUD4 166 aaPredicted RBP16.59■□□□□ 0.25
HDAC6-214ENST00000465269 GAB3Q8WWW8 586 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 DDX27Q96GQ7 796 aaKnown RBP16.59■□□□□ 0.25
HDAC6-214ENST00000465269 ZFYVE19Q96K21 471 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 TRPV5Q9NQA5 729 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 VAV3Q9UKW4 847 aa16.59■□□□□ 0.25
HDAC6-214ENST00000465269 TAF4O00268 1085 aa16.58■□□□□ 0.24
HDAC6-214ENST00000465269 PRRG1O14668 218 aa16.58■□□□□ 0.24
HDAC6-214ENST00000465269 CCDC192P0DO97 292 aa16.58■□□□□ 0.24
HDAC6-214ENST00000465269 YWHABP31946 246 aaKnown RBP16.58■□□□□ 0.24
HDAC6-214ENST00000465269 BRCC3P46736 316 aa16.58■□□□□ 0.24
HDAC6-214ENST00000465269 NCBP1Q09161 790 aaKnown RBP16.58■□□□□ 0.24
HDAC6-214ENST00000465269 ADCK5Q3MIX3 580 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms