RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 NCKAP1LP55160 1127 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 PTPAQ15257 358 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-225ENST00000465268 ALYREFQ86V81 257 aaKnown RBP16.32■□□□□ 0.2
MRPL55-225ENST00000465268 GPBP1Q86WP2 473 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-225ENST00000465268 DDX27Q96GQ7 796 aaKnown RBP16.32■□□□□ 0.2
MRPL55-225ENST00000465268 CDK5RAP3Q96JB5 506 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 ACAP3Q96P50 834 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 ZDHHC7Q9NXF8 308 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 CNTN3Q9P232 1028 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 ANKFY1Q9P2R3 1169 aa16.32■□□□□ 0.2
MRPL55-225ENST00000465268 PODXLO00592 558 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-225ENST00000465268 OR1D2P34982 312 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 YARSP54577 528 aaKnown RBP16.31■□□□□ 0.2
MRPL55-225ENST00000465268 CREMQ03060 361 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 SPAG1Q07617 926 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 RESTQ13127 1097 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 ZBTB41Q5SVQ8 909 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 CYP26C1Q6V0L0 522 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 GRASPQ7Z6J2 395 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-225ENST00000465268 KCTD17Q8N5Z5 321 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 AK8Q96MA6 479 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 FIZ1Q96SL8 496 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 KCNH6Q9H252 994 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 MTRRQ9UBK8 725 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 DPP7Q9UHL4 492 aa16.31■□□□□ 0.2
MRPL55-225ENST00000465268 TDRD15B5MCY1 1934 aaKnown RBP16.3■□□□□ 0.2
MRPL55-225ENST00000465268 CCL16O15467 120 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 TOM1L1O75674 476 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 C8AP07357 584 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-225ENST00000465268 UBA7P41226 1012 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 TNFSF9P41273 254 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 MCL1Q07820 350 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 ELAVL2Q12926 359 aaKnown RBP16.3■□□□□ 0.2
MRPL55-225ENST00000465268 STRN3Q13033 797 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 TDGQ13569 410 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 RAB33AQ14088 237 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 GET4Q7L5D6 327 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-225ENST00000465268 HAUS6Q7Z4H7 955 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 APBB1IPQ7Z5R6 666 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-225ENST00000465268 RAD54LQ92698 747 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 UROC1Q96N76 676 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 BACH2Q9BYV9 841 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 PIDD1Q9HB75 910 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-225ENST00000465268 KCND2Q9NZV8 630 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 EPS15L1Q9UBC2 864 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 TUBGCP4Q9UGJ1 667 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 CDY1Q9Y6F8 540 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 ZDBF2Q9HCK1 2354 aa16.3■□□□□ 0.2
MRPL55-225ENST00000465268 CXCL8P10145 99 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 NPR3P17342 541 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 SYT1P21579 422 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 LONP1P36776 959 aaKnown RBP16.29■□□□□ 0.2
MRPL55-225ENST00000465268 ZNF131P52739 623 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 SMTNP53814 917 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
MRPL55-225ENST00000465268 SLC39A4Q6P5W5 647 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 POTEHQ6S545 545 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 ZPBP2Q6X784 338 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 SLC7A14Q8TBB6 771 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 CALML4Q96GE6 196 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 RPP25Q9BUL9 199 aaKnown RBP16.29■□□□□ 0.2
MRPL55-225ENST00000465268 IKZF4Q9H2S9 585 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 HCFC1R1Q9NWW0 138 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 FBXO2Q9UK22 296 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-225ENST00000465268 DUSP12Q9UNI6 340 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 BACE2Q9Y5Z0 518 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
MRPL55-225ENST00000465268 CLDN3O15551 220 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 PI15O43692 258 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 FAM189A1O60320 539 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 TBC1D4O60343 1298 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 LAMP2P13473 410 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 NMT1P30419 496 aaKnown RBP16.28■□□□□ 0.2
MRPL55-225ENST00000465268 GUCY2FP51841 1108 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 CEBPZQ03701 1054 aaKnown RBP16.28■□□□□ 0.2
MRPL55-225ENST00000465268 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
MRPL55-225ENST00000465268 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-225ENST00000465268 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
MRPL55-225ENST00000465268 ELMSAN1Q6PJG2 1045 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 SLC44A3Q8N4M1 653 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 MYCT1Q8N699 235 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 ITFG1Q8TB96 612 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 KCNN1Q92952 543 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 FAM86C1Q9NVL1 165 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 LARSQ9P2J5 1176 aaKnown RBP16.28■□□□□ 0.2
MRPL55-225ENST00000465268 ODF2LQ9ULJ1 636 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 TBX20Q9UMR3 447 aa16.28■□□□□ 0.2
MRPL55-225ENST00000465268 C2orf16Q68DN1 1984 aa16.27■□□□□ 0.2
MRPL55-225ENST00000465268 TISP43B9A030 160 aa16.27■□□□□ 0.2
MRPL55-225ENST00000465268 K7ENM7 598 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms