RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TBX3O15119 743 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 GPC4O75487 556 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 DCTN3O75935 186 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 KRT37O76014 449 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 APRTP07741 180 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 ADRA2BP18089 450 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 RRM1P23921 792 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 ARL4AP40617 200 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 ARFIP2P53365 341 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 AMPD2Q01433 879 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 CDR2Q01850 454 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 GABPAQ06546 454 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 TFDP1Q14186 410 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 HIF1AQ16665 826 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 MMEL1Q495T6 779 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 CYP4A22Q5TCH4 519 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 SPOPLQ6IQ16 392 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 CYB5D1Q6P9G0 228 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 LRIG3Q6UXM1 1119 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 RBBP8NLQ8NC74 664 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 SPATA20Q8TB22 786 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 PPWD1Q96BP3 646 aaKnown RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 GJD4Q96KN9 370 aaPredicted RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 MMTAG2Q9BU76 263 aaKnown RBP9.62□□□□□ -0.87
HPS4-208ENST00000464362 OSBPL1AQ9BXW6 950 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 NUF2Q9BZD4 464 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 TMBIM4Q9HC24 238 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 UBN1Q9NPG3 1134 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 ARL2BPQ9Y2Y0 163 aa9.62□□□□□ -0.87
HPS4-208ENST00000464362 PABPN1LA6NDY0 278 aaKnown RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 GIPC1O14908 333 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 LPXNO60711 386 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 NR3C2P08235 984 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 KCNA4P22459 653 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 COG7P83436 770 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 CDK17Q00537 523 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 LONP2Q86WA8 852 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 KRT35Q92764 455 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 ZSWIM1Q9BR11 485 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 TRAIPQ9BWF2 469 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 VCPKMTQ9H867 229 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 ZNF302Q9NR11 478 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 TAS2R14Q9NYV8 317 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 PLEKHG2Q9H7P9 1386 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 ENO4A6NNW6 628 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 SHMT1P34896 483 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 PBX1P40424 430 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 BCAR1P56945 870 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 STXBP2Q15833 593 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 RC3H1Q5TC82 1133 aaKnown RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 STRIP1Q5VSL9 837 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 LRRC55Q6ZSA7 311 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 CCHCR1Q8TD31 782 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 FBXO41Q8TF61 875 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 PSPC1Q8WXF1 523 aaKnown RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 SLC5A5Q92911 643 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 SGSM3Q96HU1 749 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 NACA2Q9H009 215 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 HERC5Q9UII4 1024 aaKnown RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 NFIBO00712 420 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 MED7O43513 233 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 PIAS1O75925 651 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 ZBTB7AO95365 584 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 KRT3P12035 628 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 SKIP12755 728 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 MAGEA4P43358 317 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 SESN2P58004 480 aaPredicted RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 NFX1Q12986 1120 aaKnown RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 NCOA4Q13772 614 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 SLC10A5Q5PT55 438 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 AGBL2Q5U5Z8 902 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 HHIPL2Q6UWX4 724 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 DPP9Q86TI2 863 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 LRRC43Q8N309 656 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 LRRC71Q8N4P6 559 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 HAS1Q92839 578 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 MXRA8Q9BRK3 442 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 SHCBP1LQ9BZQ2 653 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 CXorf56Q9H5V9 222 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 LRRC4Q9HBW1 653 aa9.61□□□□□ -0.87
HPS4-208ENST00000464362 JPH1Q9HDC5 661 aaPredicted RBP9.61□□□□□ -0.87
HPS4-208ENST00000464362 GJB6O95452 261 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 MYBL1P10243 752 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 GYS1P13807 737 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 PPATQ06203 517 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 ZNF844Q08AG5 666 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 CBWD6Q4V339 395 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 CBWD3Q5JTY5 395 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 CBWD5Q5RIA9 395 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 TRIM4Q9C037 500 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 DHX35Q9H5Z1 703 aaKnown RBP9.6□□□□□ -0.87
HPS4-208ENST00000464362 SPATS2LQ9NUQ6 558 aaKnown RBP9.6□□□□□ -0.87
HPS4-208ENST00000464362 UVRAGQ9P2Y5 699 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 SALL4Q9UJQ4 1053 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 BCL9O00512 1426 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 CREB3O43889 395 aa9.6□□□□□ -0.87
HPS4-208ENST00000464362 CST8O60676 142 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms